The complete mitochondrial genome and phylogenetic analysis of Matuta planipes (Decapoda: Grachyura: Matutidae)

被引:5
作者
Lin, Fan [1 ]
Tan, Huaqiang [1 ]
Fazhan, Hanafiah [1 ]
Xie, Zhuofang [1 ]
Guan, Mengyun [1 ]
Shi, Xi [1 ]
Ma, Hongyu [1 ]
机构
[1] Shantou Univ, Guangdong Prov Key Lab Marine Biotechnol, 243 Daxue Rd, Shantou 515063, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 01期
关键词
Matuta planipes; mitochondrial genome; phylogeny; CRUSTACEA;
D O I
10.1080/23802359.2018.1437802
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genome of Matuta planipes was obtained using long and conventional PCR method. The circular genome was 15,760 bp in length, consisting of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a control region. Of the 37 genes, 23 were encoded by the heavy strand, while the others were encoded by the light strand. The genome composition with A + T bias (70.82%) and gene arrangement were largely identical to those observed in most arthropods, such as the mud crab (Scylla paramamosain). The phylogenetic analysis suggested that M. planipes was closest to Ashtoret lunaris. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Matutidae.
引用
收藏
页码:157 / 158
页数:2
相关论文
共 7 条
[2]  
De Grave S, 2009, RAFFLES B ZOOL, P1
[3]   Complete mitochondrial genome of the Asian paddle crab Charybdis japonica (Crustacea: Decapoda: Portunidae): gene rearrangement of the marine brachyurans and phylogenetic considerations of the decapods [J].
Liu, Yuan ;
Cui, Zhaoxia .
MOLECULAR BIOLOGY REPORTS, 2010, 37 (05) :2559-2569
[4]   First mitochondrial genome for the red crab (Charybdis feriata) with implication of phylogenomics and population genetics [J].
Ma, Hongyu ;
Ma, Chunyan ;
Li, Chenhong ;
Lu, Jianxue ;
Zou, Xiong ;
Gong, Yangyang ;
Wang, Wei ;
Chen, Wei ;
Ma, Lingbo ;
Xia, Lianjun .
SCIENTIFIC REPORTS, 2015, 5
[5]   The complete mitochondrial genome sequence and gene organization of the mud crab (Scylla paramamosain) with phylogenetic consideration [J].
Ma, Hongyu ;
Ma, Chunyan ;
Li, Xincang ;
Xu, Zhen ;
Feng, Nana ;
Ma, Lingbo .
GENE, 2013, 519 (01) :120-127
[6]  
Ng Peter K.L., 2008, Raffles Bulletin of Zoology Supplement, V17, P1
[7]  
Silambarasan K., 2014, Arthropods, V3, P43