Synthesis, molecular docking, and in silico ADMET studies of 4-ben-zyl-1-(2,4,6-trimethyl-benzyl)-piperidine: Potential Inhibitor of SARS-CoV2

被引:30
作者
Asha, R. Nandini [1 ,2 ,3 ]
Nayagam, B. Ravindran Durai [1 ,2 ,3 ]
Bhuvanesh, Nattamai [4 ]
机构
[1] Popes Coll Autonomous, Dept Chem, Sawyerpuram 628251, India
[2] Popes Coll Autonomous, Res Ctr, Sawyerpuram 628251, India
[3] Manonmaniam Sundaranar Univ, Tirunelveli 627012, Tamil Nadu, India
[4] Texas A&M Univ, Dept Chem, College Stn, TX 77842 USA
关键词
SARS-COV2; ADME studies; Crystal structure; DFT; Molecular docking; NBO ANALYSIS; HOMO-LUMO; FT-IR; 1ST-ORDER HYPERPOLARIZABILITY; BIOLOGICAL EVALUATION; DRUG DESIGN; SPIKE; CORONAVIRUSES; REPLICATION; SOLUBILITY;
D O I
10.1016/j.bioorg.2021.104967
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Nowadays, over 200 countries face a wellbeing emergency because of epidemiological disease COVID-19 caused by the SARS-CoV-2 virus. It will cause a very high effect on the world's economy and the worldwide health sector. The present work is an investigation of the newly synthesized 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine (M1BZP) molecule's inhibitory potential against important protein targets of SARS-CoV-2 using computational approaches. M1BZP crystallizes in monoclinic type with P1211 space group. For the title compound M1BZP, spectroscopic characterization like 1H NMR, 13C NMR, FTIR, were carried out. The geometry of the compound had been optimized by the DFT method and its results were compared with the X-ray diffraction data. The calculated energies for the Highest Occupied Molecular Orbital (HOMO) and the Lowest Unoccupied Molecular Orbital (LUMO) showed the stability and reactivity of the title compound. Intermolecular interactions in the crystal network were determined using Hirshfeld surface analyses. The molecular electrostatic potential (MEP) picture was drawn using the same level of theory to visualize the chemical reactivity and charge distribution on the molecule. Molecular docking study performed for the synthesized compound revealed an efficient interaction with the COVID-19 protease and resulted in good activities. We hope the present study would help workers in the field to develop potential vaccines and therapeutics against the novel coronavirus. Virtual ADME studies were carried out as well and a relationship between biological, electronic, and physicochemical qualifications of the target compound was determined. Toxicity prediction by computational technique for the title compound was also carried out.
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页数:13
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