Shedding new light on the origin and spread of the brinjal eggplant (Solanum melongena L.) and its wild relatives

被引:30
作者
Aubriot, Xavier [1 ,2 ]
Knapp, Sandra [1 ]
Syfert, Mindy M. [1 ]
Pocze, Peter [3 ]
Buerki, Sven [1 ,4 ]
机构
[1] Nat Hist Museum, Dept Life Sci, Cromwell Rd, London SW7 5BD, England
[2] Univ Rennes 1, Observ Sci, Unite Mixte Rech Ecosyst Biodiversite Evolut ECOB, Univ Rennes,CNRS, Rennes, France
[3] Univ Helsinki, Bot Unit, Finnish Museum Nat Hist, POB 7, FI-00014 Helsinki, Finland
[4] Boise State Univ, Dept Biol Sci, 1910 Univ Dr, Boise, ID 83725 USA
关键词
biogeography; chloroplast genome; crop wild relatives (CWRs); dispersal; eggplant (aubergine); mammalian herbivores; molecular dating; phylogenomics; Solanaceae; VEGETATION CHANGE; CROP; SOLANACEAE; INFERENCE; DIVERSITY; EVOLUTION; HISTORY; AFRICA; RECORD; DIET;
D O I
10.1002/ajb2.1133
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
PREMISE OF THE STUDY: While brinjal eggplant (Solanum melongena L.) is the second most important solanaceous fruit crop, we lack firm knowledge of its evolutionary relationships. This in turn limits efficient use of crop wild relatives in eggplant improvement. Here, we examine the hypothesis of linear step-wise expansion of the eggplant group from Africa to Asia. METHODS: We use museum collections to generate nuclear and full-plastome data for all species of the Eggplant clade. We combine a phylogenomic approach with distribution data to infer a biogeographic scenario for the clade. KEY RESULTS: The Eggplant clade has Pleistocene origins in northern Africa. Dispersals to tropical Asia gave rise to Solanum insanum, the wild progenitor of the eggplant, and to African distinct lineages of widespread and southern African species. Results suggest that spread of the species to southern Africa has been recent and likely facilitated by large mammalian herbivores, such as the African elephant and impala feeding on Solanum fruit. CONCLUSIONS: Rather than a linear Out Of Africa' sequence, our results are more consistent with an initial dispersal event into Asia, and subsequent wide dispersal and differentiation across Africa driven by large mammalian herbivores. Our evolutionary results will affect future work on eggplant domestication and affect the use of wild relatives in breeding of this increasingly important solanaceous crop.
引用
收藏
页码:1175 / 1187
页数:13
相关论文
共 80 条
[61]   An Improved Chloroplast DNA Extraction Procedure for Whole Plastid Genome Sequencing [J].
Shi, Chao ;
Hu, Na ;
Huang, Hui ;
Gao, Ju ;
Zhao, You-Jie ;
Gao, Li-Zhi .
PLOS ONE, 2012, 7 (02)
[62]  
Solanaceae Source Database, 2017, SOL SOURC GLOB TAX R
[63]  
Stamatakis A., 2016, RAXML V8 2 XMANUAL
[64]   RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies [J].
Stamatakis, Alexandros .
BIOINFORMATICS, 2014, 30 (09) :1312-1313
[65]   Molecular delimitation of clades within New World species of the "spiny solanums" (Solanum subg. Leptostemonum) [J].
Stern, Stephen ;
Agra, Maria de Fatima ;
Bohs, Lynn .
TAXON, 2011, 60 (05) :1429-1441
[66]   Crop wild relatives of the brinjal eggplant (Solanum melongena): Poorly represented in genebanks and many species at risk of extinction [J].
Syfert, Mindy M. ;
Castaneda-Alvarez, Nora P. ;
Khoury, Colin K. ;
Sarkinen, Tiina ;
Sosa, Chrystian C. ;
Achicanoy, Harold A. ;
Bernau, Vivian ;
Prohens, Jaime ;
Daunay, Marie-Christine ;
Knapp, Sandra .
AMERICAN JOURNAL OF BOTANY, 2016, 103 (04) :635-651
[67]  
Thiers B.M., 2021, Index Herbariorum: A global directory of public herbaria and associated staff
[68]   What can we do with 1000 plastid genomes? [J].
Tonti-Filippini, Julian ;
Nevill, Paul G. ;
Dixon, Kingsley ;
Small, Ian .
PLANT JOURNAL, 2017, 90 (04) :808-818
[69]   Neogene biomarker record of vegetation change in eastern Africa [J].
Uno, Kevin T. ;
Polissar, Pratigya J. ;
Jackson, Kevin E. ;
deMenocal, Peter B. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 113 (23) :6355-6363
[70]   Late Miocene to Pliocene carbon isotope record of differential diet change among East African herbivores [J].
Uno, Kevin T. ;
Cerling, Thure E. ;
Harris, John M. ;
Kunimatsu, Yutaka ;
Leakey, Meave G. ;
Nakatsukasa, Masato ;
Nakaya, Hideo .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (16) :6509-6514