Epigenetic alteration of p16 and retinoic acid receptor beta genes in the development of epithelial ovarian carcinoma

被引:25
作者
Bhagat, Rahul [1 ]
Kumar, Sandeep Sriram [1 ]
Vaderhobli, Shilpa [1 ]
Premalata, Chennagiri S. [2 ]
Pallavi, Venkateshaiah Reddihalli [3 ]
Ramesh, Gawari [1 ]
Krishnamoorthy, Lakshmi [4 ]
机构
[1] Kidwai Mem Inst Oncol, Dept Biochem, Bangalore 560029, Karnataka, India
[2] Kidwai Mem Inst Oncol, Dept Pathol, Bangalore 560029, Karnataka, India
[3] Kidwai Mem Inst Oncol, Dept Gynaec Oncol, Bangalore 560029, Karnataka, India
[4] Sri Shankara Canc Hosp & Res Ctr, Dept Lab Med, Bangalore 560004, Karnataka, India
关键词
Ovarian carcinoma; p16; RAR-beta; MSP; Gene expression; TUMOR-SUPPRESSOR GENES; PROMOTER HYPERMETHYLATION; DNA METHYLATION; BREAST-CANCER; HIGH-FREQUENCY; RAR-BETA; EXPRESSION; CELL; INACTIVATION; PROGNOSIS;
D O I
10.1007/s13277-014-2136-1
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Silencing of tumor suppressor and tumor-related genes by promoter hypermethylation is one of the major events in ovarian carcinogenesis. In this study, we analyzed aberrant promoter methylation of p16 and RAR-beta genes in 134 epithelial ovarian carcinomas (EOCs), 23 low malignant potential (LMP) tumors, 26 benign cystadenomas, and 15 normal ovarian tissues. Methylation was investigated by methylation-specific PCR (MSP), and the results were confirmed by bisulfite DNA sequencing. Relative gene expression of p16 and RAR-beta was done using quantitative reverse transcriptase PCR (qRT-PCR) on 51 EOC cases, 9 LMP tumors, and 7 benign cystadenomas with 5 normal ovarian tissues. Aberrant methylation for p16 and RAR-beta was present in 43 % (58/134) and 31 % (41/134) in carcinoma cases, 22 % (05/23) and 52 % (12/23) in LMP tumors, and 42 % (11/26) and 69 % (18/26) in benign cystadenomas. No methylation was observed in any of the normal ovarian tissues. The mRNA expression level of p16 and RAR-beta was significantly downregulated in EOC and LMP tumors than the corresponding normal tissues whereas the expression level was normal in benign cystadenomas for p16 and slightly reduced for RAR-beta. A significant correlation of p16 promoter methylation was observed with reduced gene expression in EOC. For RAR-beta, no significant correlation was observed between promoter methylation and gene expression. Our results suggest that epigenetic alterations of p16 and RAR-beta have an important role in ovarian carcinogenesis and that mechanism along with methylation plays a significant role in downregulation of RAR-beta gene in ovarian cancer.
引用
收藏
页码:9069 / 9078
页数:10
相关论文
共 55 条
[31]   Promoter hypermethylation profile of ovarian epithelial neoplasms [J].
Makarla, PB ;
Saboorian, MH ;
Ashfaq, R ;
Toyooka, KO ;
Toyooka, S ;
Minna, JD ;
Gazdar, AF ;
Schorge, JO .
CLINICAL CANCER RESEARCH, 2005, 11 (15) :5365-5369
[32]   Absence of deletions but frequent loss of expression of p16(INK4) in human ovarian tumours [J].
Marchini, S ;
Codegoni, AM ;
Bonazzi, C ;
Chiari, S ;
Broggini, M .
BRITISH JOURNAL OF CANCER, 1997, 76 (02) :146-149
[33]   Differences in p16 gene methylation and expression in benign and malignant ovarian tumors [J].
McCluskey, LL ;
Chen, C ;
Delgadillo, E ;
Felix, JC ;
Muderspach, LI ;
Dubeau, L .
GYNECOLOGIC ONCOLOGY, 1999, 72 (01) :87-92
[34]  
MENDELSOHN C, 1994, DEVELOPMENT, V120, P2749
[35]  
Milde-Langosch K, 1998, INT J CANCER, V79, P61, DOI 10.1002/(SICI)1097-0215(19980220)79:1<61::AID-IJC12>3.0.CO
[36]  
2-K
[37]   The role of epigenetic modifications in retinoic acid receptor β2 gene expression in human prostate cancers [J].
Nakayama, T ;
Watanabe, M ;
Yamanaka, M ;
Hirokawa, Y ;
Suzuki, H ;
Ito, H ;
Yatani, R ;
Shiraishi, T .
LABORATORY INVESTIGATION, 2001, 81 (07) :1049-1057
[38]   CDKN2A gene inactivation in epithelial sporadic ovarian cancer [J].
Niederacher, D ;
Yan, HY ;
An, HX ;
Bender, HG ;
Beckmann, MW .
BRITISH JOURNAL OF CANCER, 1999, 80 (12) :1920-1926
[39]   DELETIONS OF THE CYCLIN-DEPENDENT KINASE-4 INHIBITOR GENE IN MULTIPLE HUMAN CANCERS [J].
NOBORI, T ;
MIURA, K ;
WU, DJ ;
LOIS, A ;
TAKABAYASHI, K ;
CARSON, DA .
NATURE, 1994, 368 (6473) :753-756
[40]   Precision and performance characteristics of bisulfite conversion and real-time PCR (MethyLight) for quantitative DNA methylation analysis [J].
Ogino, Shuji ;
Kawasaki, Takako ;
Brahmandam, Mohan ;
Cantor, Mami ;
Kirkner, Gregory J. ;
Spiegelman, Donna ;
Makrigiorgos, G. Mike ;
Weisenberger, Daniel J. ;
Laird, Peter W. ;
Loda, Massimo ;
Fuchs, Charles S. .
JOURNAL OF MOLECULAR DIAGNOSTICS, 2006, 8 (02) :209-217