Membrane protein structure from rotational diffusion

被引:20
作者
Das, Bibhuti B. [1 ]
Park, Sang Ho [1 ]
Opella, Stanley J. [1 ]
机构
[1] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES | 2015年 / 1848卷 / 01期
基金
美国国家卫生研究院;
关键词
Membrane protein; Protein structure determination; NMR spectroscopy; Rotational diffusion; Phospholipid bilayer; SOLID-STATE NMR; NUCLEAR-MAGNETIC-RESONANCE; CHEMOKINE RECEPTOR CXCR1; ANGLE-SPINNING NMR; HETERONUCLEAR DIPOLAR COUPLINGS; PHOSPHOLIPID-BILAYERS; ESCHERICHIA-COLI; CHEMICAL-SHIFT; LIPID-BILAYER; COAT PROTEIN;
D O I
10.1016/j.bbamem.2014.04.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The motional averaging of powder pattern line shapes is one of the most fundamental aspects of sold-state NMR. Since membrane proteins in liquid crystalline phospholipid bilayers undergo fast rotational diffusion, all of the signals reflect the angles of the principal axes of their dipole-dipole and chemical shift tensors-with respect to the axis defined by the bilayer normal. The frequency span and sign of the axially symmetric powder patterns that result from motional averaging about a common axis provide sufficient structural restraints for the calculation of the three-dimensional structure of a membrane protein in a phospholipid bilayer environment. The method is referred to as rotationally aligned (RA) solid-state NMR and demonstrated with results on full-length, unmodified membrane proteins with one, two, and seven trans-membrane helices. RA solid-state NMR is complementary to other solid-state NMR methods, in particular oriented sample (OS) solid-state NMR of stationary, aligned samples. Structural distortions of membrane proteins from the truncations of terminal residues and other sequence modifications, and the use of detergent micelles instead of phospholipid bilayers have also been demonstrated. Thus, it is highly advantageous to determine the structures of unmodified membrane proteins in liquid crystalline phospholipid bilayers under physiological conditions. RA solid-state NMR provides a general method for obtaining accurate and precise structures of membrane proteins under near-native conditions. This article is part of a Special Issue entitled: NMR Spectroscopy for Atomistic Views of Biomembranes and Cell Surfaces. Guest Editors: Lynette Cegelski and David P. Weliky. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:229 / 245
页数:17
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