Proteins with H-bond packing defects are highly interactive with lipid bilayers:: Implications for amyloidogenesis

被引:72
作者
Fernández, A
Berry, RS
机构
[1] Univ Chicago, Dept Comp Sci, Inst Biophys Dynam, Chicago, IL 60637 USA
[2] Osaka Univ, Inst Prot Res, Osaka 565, Japan
[3] Univ Chicago, James Franck Inst, Chicago, IL 60637 USA
[4] Univ Chicago, Dept Chem, Chicago, IL 60637 USA
关键词
D O I
10.1073/pnas.0335642100
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We noticed that disease-related amyloidogenic proteins and especially cellular prion proteins have the highest proportion of incompletely desolvated backbone H bonds among soluble proteins. Such bonds are vulnerable to water attack and thus represent structural weaknesses. We have measured the adsorption of proteins onto phospholipid bilayers and found a strong correlation between the extent of underwrapping of backbone H bonds in the native structure of a protein and its extent of deposition on the bilayer: the less the H bond wrapping, the higher the propensity for protein-bilayer binding. These observations support the proposition that soluble proteins with amyloidogenic propensity and membrane proteins share a pervasive building motif: the under-wrapped H bonds. Whereas in membrane proteins, this motif does not signal a structural vulnerability, in soluble proteins, it is responsible for their reactivity.
引用
收藏
页码:2391 / 2396
页数:6
相关论文
共 30 条
[1]   Is protein folding hierarchic? I. Local structure and peptide folding [J].
Baldwin, RL ;
Rose, GD .
TRENDS IN BIOCHEMICAL SCIENCES, 1999, 24 (01) :26-33
[2]  
BLEASBY AJ, 1994, NUCLEIC ACIDS RES, V22, P3574
[3]   Instability, unfolding and aggregation of human lysozyme variants underlying amyloid fibrillogenesis [J].
Booth, DR ;
Sunde, M ;
Bellotti, V ;
Robinson, CV ;
Hutchinson, WL ;
Fraser, PE ;
Hawkins, PN ;
Dobson, CM ;
Radford, SE ;
Blake, CCF ;
Pepys, MB .
NATURE, 1997, 385 (6619) :787-793
[4]   Characterization of the structure and dynamics of amyloidogenic variants of human lysozyme by NMR spectroscopy [J].
Chamberlain, AK ;
Receveur, V ;
Spencer, A ;
Redfield, C ;
Dobson, CM .
PROTEIN SCIENCE, 2001, 10 (12) :2525-2530
[5]   Protein misfolding, evolution and disease [J].
Dobson, CM .
TRENDS IN BIOCHEMICAL SCIENCES, 1999, 24 (09) :329-332
[6]  
FAUCHERE JL, 1983, EUR J MED CHEM, V18, P369
[7]   Pathway heterogeneity in protein folding [J].
Fernández, A ;
Colubri, A .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2002, 48 (02) :293-310
[8]   Protein folding:: Is hierarchical versus nonhierarchical a productive issue? [J].
Fernández, A .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2002, 19 (05) :735-737
[9]   Three-body correlations in protein folding:: the origin of cooperativity [J].
Fernández, A ;
Colubri, A ;
Berry, RS .
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2002, 307 (1-2) :235-259
[10]   Extent of hydrogen-bond protection in folded proteins:: A constraint on packing architectures [J].
Fernández, A ;
Berry, RS .
BIOPHYSICAL JOURNAL, 2002, 83 (05) :2475-2481