A stoichiometric analysis of biological xylitol production

被引:16
作者
Aranda-Barradas, Juan S. [1 ]
Garibay-Orijel, Claudio [1 ]
Badillo-Corona, Jesus A. [2 ]
Salgado-Manjarrez, Edgar [1 ]
机构
[1] Natl Polytech Inst UPIBI IPN, Dept Bioengn, Profess Unit Biotechnol, Mexico City 07340, DF, Mexico
[2] Natl Polytech Inst UPIBI IPN, Dept Bioproc, Profess Unit Biotechnol, Mexico City 07340, DF, Mexico
关键词
Xylose; Xylitol; Candida parapsilosis; Metabolic network; Stoichiometric matrix; Stoichiometric model; RARE SUGAR XYLITOL; OXYGEN-TRANSFER; SACCHAROMYCES-CEREVISIAE; CANDIDA-GUILLIERMONDII; D-XYLOSE; FERMENTATION; BIOCONVERSION; MODEL; PARAPSILOSIS; PREDICTION;
D O I
10.1016/j.bej.2009.10.023
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
In the biological production of xylitol from xylose it has been demonstrated that a low-level supply of oxygen to the culture (similar to 0.1 volume of air per volume of culture medium per minute) yields an increase of extracellular accumulated xylitol up to 0.65 g(xylitol) g(xylose)(-1) in our experiments. In spite of the abundant experimental evidence regarding xylitol production, the advances in the mathematical description of the process are relatively scarce. In this work, a stoichiometric model considering the main biochemical reactions (metabolic fluxes) involved in microaerobic xylitol production is proposed. The main metabolic reactions in xylitol production by Candida parapsilosis were incorporated in order to establish a stoichiometric reaction rate analysis of the network. The reaction rates in the metabolic network were calculated both for determined and underdetermined systems. A comparison between predicted and experimentally measured or reported yields has shown that the proposed stoichiometric model correctly depicts the xylitol yield within a 12.8% average error for several xylose-assimilating yeasts. The expected xylitol concentrations for a production process were also estimated after a sensitivity analysis of the metabolic network. An analysis of the estimated metabolic fluxes provided insight into some physiological events involved in the production of xylitol by yeasts. (C) 2010 Published by Elsevier B.V.
引用
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页码:1 / 9
页数:9
相关论文
共 54 条
[1]   Growth model and prediction of oxygen transfer rate for xylitol production from D-xylose by C-guilliermondii [J].
Aguiar, WB ;
Faria, LFF ;
Couto, MAPG ;
Araujo, OQF ;
Pereira, N .
BIOCHEMICAL ENGINEERING JOURNAL, 2002, 12 (01) :49-59
[2]  
[Anonymous], 1997, PHYS CHEMESTRY EMGIN, DOI DOI 10.1121/1.418074
[3]   Kinetic study and modelling of the xylitol production using Candida parapsilosis in oxygen-limited culture conditions [J].
Aranda-Barradas, JS ;
Delia, ML ;
Riba, JP .
BIOPROCESS ENGINEERING, 2000, 22 (03) :219-225
[4]   Metabolic engineering applications to renewable resource utilization [J].
Aristidou, A ;
Penttilä, M .
CURRENT OPINION IN BIOTECHNOLOGY, 2000, 11 (02) :187-198
[5]   Complex biology with no parameters [J].
Bailey, JE .
NATURE BIOTECHNOLOGY, 2001, 19 (06) :503-504
[6]  
Bakr AA, 1997, NAHRUNG, V41, P170, DOI 10.1002/food.19970410312
[7]   BRENDA, AMENDA and FRENDA: the enzyme information system in 2007 [J].
Barthelmes, Jens ;
Ebeling, Christian ;
Chang, Antje ;
Schomburg, Ida ;
Schomburg, Dietmar .
NUCLEIC ACIDS RESEARCH, 2007, 35 :D511-D514
[8]   Xylitol production in a bubble column bioreactor: Influence of the aeration rate and immobilized system concentration [J].
Branco, Ricardo F. ;
Santos, Julio C. ;
Murakami, Lucilene Y. ;
Mussatto, Solange I. ;
Dragone, Giuliano ;
Silva, Silvio S. .
PROCESS BIOCHEMISTRY, 2007, 42 (02) :258-262
[9]  
BRUNZELL JD, 1978, J AM DIET ASSOC, V73, P499
[10]   Metabolic modeling of microbial strains in silico [J].
Covert, MW ;
Schilling, CH ;
Famili, I ;
Edwards, JS ;
Goryanin, II ;
Selkov, E ;
Palsson, BO .
TRENDS IN BIOCHEMICAL SCIENCES, 2001, 26 (03) :179-186