Elucidation of enzyme mechanisms using fluorinated substrate analogues

被引:49
作者
Pongdee, R [1 ]
Liu, HW [1 ]
机构
[1] Univ Texas, Coll Pharm, Dept Chem & Biochem, Div Med Chem, Austin, TX 78712 USA
关键词
fluorinated substrates;
D O I
10.1016/j.bioorg.2004.06.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A great variety of biological reactions that are physiologically important are catalyzed by enzymes. Understanding the reaction course of these enzyme-catalyzed transformations are of significant importance since the insights gained from these experiments may facilitate the design of methods to control or mimic their actions. A common strategy to study enzyme catalyses is to use fluorinated substrate analogues as mechanistic probes, since fluorine is an effective hydroxyl group mimic and can also be used to replace a hydrogen atom. Using fluorinated substrate probes have enabled researchers to obtain crucial information regarding the catalytic mechanism of enzymatic reactions. Many of these compounds are good enzyme inhibitors and have been developed into clinically useful chemotherapeutic agents. This review will discuss some examples of the use of fluorine containing compounds as mechanistic probes/enzyme inhibitors, many of which are selected from our own work. (C) 2004 Elsevier Inc. All rights reserved.
引用
收藏
页码:393 / 437
页数:45
相关论文
共 131 条
[1]   ISOLATION AND STRUCTURAL ELUCIDATION OF THE TETRAHEDRAL INTERMEDIATE IN THE EPSP SYNTHASE ENZYMATIC PATHWAY [J].
ANDERSON, KS ;
SIKORSKI, JA ;
BENESI, AJ ;
JOHNSON, KA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (19) :6577-6579
[2]   A TETRAHEDRAL INTERMEDIATE IN THE EPSP SYNTHASE REACTION OBSERVED BY RAPID QUENCH KINETICS [J].
ANDERSON, KS ;
SIKORSKI, JA ;
JOHNSON, KA .
BIOCHEMISTRY, 1988, 27 (19) :7395-7406
[3]   Positional isotope exchange catalyzed by UDP-galactopyranose mutase [J].
Barlow, JN ;
Girvin, ME ;
Blanchard, JS .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (29) :6968-6969
[4]   Trapping of the C5 methylene intermediate in thymidylate synthase [J].
Barrett, JE ;
Maltby, DA ;
Santi, DV ;
Schultz, PG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (02) :449-450
[5]   SYNTHESIS OF ISO-EPSP AND EVALUATION OF ITS INTERACTION WITH CHORISMATE SYNTHASE [J].
BARTLETT, PA ;
MAITRA, U ;
CHOUINARD, PM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (25) :8068-8071
[6]  
BARTLETT PA, 1989, BCPC MONOGRAPH, V42, P155
[7]   THE MOLECULAR-STRUCTURE OF UDP-GALACTOSE 4-EPIMERASE FROM ESCHERICHIA-COLI DETERMINED AT 2.5 A-RESOLUTION [J].
BAUER, AJ ;
RAYMENT, I ;
FREY, PA ;
HOLDEN, HM .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1992, 12 (04) :372-381
[8]   The biosynthesis and degradation of thiamin (Vitamin B-1) [J].
Begley, TP .
NATURAL PRODUCT REPORTS, 1996, 13 (03) :177-185
[9]   STUDIES ON MODELS FOR TETRAHYDROFOLIC ACID .I. CONDENSATION OF FORMALDEHYDE WITH ETRAHYDROQUINOXALINE ANALOGS [J].
BENKOVIC, SJ ;
BENKOVIC, PA ;
COMFORT, DR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1969, 91 (19) :5270-&
[10]   ESCHERICHIA-COLI CHORISMATE SYNTHASE CATALYZES THE CONVERSION OF (6S)-6-FLUORO-5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE TO 6-FLUOROCHORISMATE - IMPLICATIONS FOR THE ENZYME MECHANISM AND THE ANTIMICROBIAL ACTION OF (6S)-6-FLUOROSHIKIMATE [J].
BORNEMANN, S ;
RAMJEE, MK ;
BALASUBRAMANIAN, S ;
ABELL, C ;
COGGINS, JR ;
LOWE, DJ ;
THORNELEY, RNF .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1995, 270 (39) :22811-22815