A systems biology approach for diagnostic and vaccine antigen discovery in tropical infectious diseases

被引:20
作者
Liang, Li [1 ]
Felgner, Philip L. [1 ]
机构
[1] Univ Calif Irvine, Dept Med, Div Infect Dis, Irvine, CA 92697 USA
关键词
antigen; immune response; protein microarray; serodiagnostic; HUMORAL IMMUNE-RESPONSES; PLASMODIUM-FALCIPARUM; PROTEIN MICROARRAY; BURKHOLDERIA-PSEUDOMALLEI; IMMUNODOMINANT ANTIGENS; FRANCISELLA-TULARENSIS; ANTIBODY-RESPONSES; IDENTIFICATION; REVEALS; GENOME;
D O I
10.1097/QCO.0000000000000193
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Purpose of review There is a need for improved diagnosis and for more rapidly assessing the presence, prevalence, and spread of newly emerging or reemerging infectious diseases. An approach to the pathogen-detection strategy is based on analyzing host immune response to the infection. This review focuses on a protein microarray approach for this purpose. Recent findings Here we take a protein microarray approach to profile the humoral immune response to numerous infectious agents, and to identify the complete antibody repertoire associated with each disease. The results of these studies lead to the identification of diagnostic markers and potential subunit vaccine candidates. These results from over 30 different organisms can also provide information about common trends in the humoral immune response. Summary This review describes the implications of the findings for clinical practice or research. A systems biology approach to identify the antibody repertoire associated with infectious diseases challenge using protein microarray has become a powerful method in identifying diagnostic markers and potential subunit vaccine candidates, and moreover, in providing information on proteomic feature (functional and physically properties) of seroreactive and serodiagnostic antigens. Combining the detection of the pathogen with a comprehensive assessment of the host immune response will provide a new understanding of the correlations between specific causative agents, the host response, and the clinical manifestations of the disease.
引用
收藏
页码:438 / 445
页数:8
相关论文
共 52 条
[11]   A prospective analysis of the Ab response to Plasmodium falciparum before and after a malaria season by protein microarray [J].
Crompton, Peter D. ;
Kayala, Matthew A. ;
Traore, Boubacar ;
Kayentao, Kassoum ;
Ongoiba, Aissata ;
Weiss, Greta E. ;
Molina, Douglas M. ;
Burk, Chad R. ;
Waisberg, Michael ;
Jasinskas, Algis ;
Tan, Xiaolin ;
Doumbo, Safiatou ;
Doumtabe, Didier ;
Kone, Younoussou ;
Narum, David L. ;
Liang, Xiaowu ;
Doumbo, Ogobara K. ;
Miller, Louis H. ;
Doolan, Denise L. ;
Baldi, Pierre ;
Felgner, Philip L. ;
Pierce, Susan K. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (15) :6958-6963
[12]   Antibody profiling by proteome microarray reveals the immunogenicity of the attenuated smallpox vaccine modified vaccinia virus Ankara is comparable to that of Dryvax [J].
Davies, D. Huw ;
Wyatt, Linda S. ;
Newman, Frances K. ;
Earl, Patricia L. ;
Chun, Sookhee ;
Hernandez, Jenny E. ;
Molina, Douglas M. ;
Hirst, Siddiqua ;
Moss, Bernard ;
Frey, Sharon E. ;
Felgner, Philip L. .
JOURNAL OF VIROLOGY, 2008, 82 (02) :652-663
[13]   Vaccinia virus H3L envelope protein is a major target of neutralizing antibodies in humans and elicits protection against lethal challenge in mice [J].
Davies, DH ;
McCausland, MM ;
Valdez, C ;
Huynh, D ;
Hernandez, JE ;
Mu, YX ;
Hirst, S ;
Villarreal, L ;
Felgner, PL ;
Crotty, S .
JOURNAL OF VIROLOGY, 2005, 79 (18) :11724-11733
[14]   Profiling the humoral immune response to infection by using proteome microarrays: High-throughput vaccine and diagnostic antigen discovery [J].
Davies, DH ;
Liang, XW ;
Hernandez, JE ;
Randall, A ;
Hirst, S ;
Mu, YX ;
Romero, KM ;
Nguyen, TT ;
Kalantari-Dehaghi, M ;
Crotty, S ;
Baldi, P ;
Villarreal, LP ;
Felgner, PL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (03) :547-552
[15]   Profiling humoral immune responses to P-falciparum infection with protein microarrays [J].
Doolan, Denise L. ;
Mu, Yunxiang ;
Unal, Berkay ;
Sundaresh, Suman ;
Hirst, Siddiqua ;
Valdez, Conrad ;
Randall, Arlo ;
Molina, Douglas ;
Liang, Xiaowu ;
Freilich, Daniel A. ;
Oloo, J. Aggrey ;
Blair, Peter L. ;
Aguiar, Joao C. ;
Baldi, Pierre ;
Davies, D. Huw ;
Felgner, Philip L. .
PROTEOMICS, 2008, 8 (22) :4680-4694
[16]   GRA1 protein vaccine confers better immune response compared to codon-optimized GRA1 DNA vaccine [J].
Doskaya, Mert ;
Kalantari-Dehaghi, Mina ;
Walsh, Craig M. ;
Hiszczynska-Sawicka, Elzbieta ;
Davies, D. Huw ;
Felgner, Philip L. ;
Larsen, Liza S. Z. ;
Lathrop, Richard H. ;
Hatfield, G. Wesley ;
Schulz, Jessica R. ;
Guruz, Yuksel ;
Jurnak, Frances .
VACCINE, 2007, 25 (10) :1824-1837
[17]   Schistosomiasis vaccine discovery using immunomics [J].
Driguez, Patrick ;
Doolan, Denise L. ;
Loukas, Alex ;
Felgner, Philip L. ;
McManus, Donald P. .
PARASITES & VECTORS, 2010, 3
[18]   Immunodominant Francisella tularensis antigens identified using proteome microarray. Crown Copyright 2007 Dstl [J].
Eyles, Jim E. ;
Unal, Berkay ;
Hartley, Margaret Gill ;
Newstead, Sarah L. ;
Flick-Smith, Helen ;
Prior, Joann L. ;
Oyston, Petra C. F. ;
Randall, Arlo ;
Mu, Yunxiang ;
Hirst, Siddiqua ;
Molina, Douglas M. ;
Davies, D. Huw ;
Milne, Tim ;
Griffin, Kate F. ;
Baldi, Pierre ;
Titball, Rick W. ;
Felgner, Philip L. .
PROTEOMICS, 2007, 7 (13) :2172-2183
[19]   A Burkholderia pseudomallei protein microarray reveals serodiagnostic and cross-reactive antigens [J].
Felgner, Philip L. ;
Kayala, Matthew A. ;
Vigil, Adam ;
Burk, Chad ;
Nakajima-Sasaki, Rie ;
Pablo, Jozelyn ;
Molina, Douglas M. ;
Hirst, Siddiqua ;
Chew, Janet S. W. ;
Wang, Dongling ;
Tan, Gladys ;
Duffield, Melanie ;
Yang, Ron ;
Neel, Julien ;
Chantratita, Narisara ;
Bancroft, Greg ;
Lertmemongkolchai, Ganjana ;
Davies, D. Huw ;
Baldi, Pierre ;
Peacock, Sharon ;
Titball, Richard W. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (32) :13499-13504
[20]   An Immunomics Approach to Schistosome Antigen Discovery: Antibody Signatures of Naturally Resistant and Chronically Infected Individuals from Endemic Areas [J].
Gaze, Soraya ;
Driguez, Patrick ;
Pearson, Mark S. ;
Mendes, Tiago ;
Doolan, Denise L. ;
Trieu, Angela ;
McManus, Donald P. ;
Gobert, Geoffrey N. ;
Periago, Maria Victoria ;
Oliveira, Rodrigo Correa ;
Cardoso, Fernanda C. ;
Oliveira, Guilherme ;
Nakajima, Rie ;
Jasinskas, Al ;
Hung, Chris ;
Liang, Li ;
Pablo, Jozelyn ;
Bethony, Jeffrey M. ;
Felgner, Philip L. ;
Loukas, Alex .
PLOS PATHOGENS, 2014, 10 (03)