Long Non-Coding RNAs As Potential Novel Prognostic Biomarkers in Colorectal Cancer

被引:65
作者
Saus, Ester [1 ,2 ]
Brunet-Vega, Anna [3 ]
Iraola-Guzman, Susana [1 ,2 ]
Pegueroles, Cinta [1 ,2 ]
Gabaldon, Toni [1 ,2 ,4 ]
Pericay, Carles [3 ,5 ]
机构
[1] Barcelona Inst Sci & Technol, Ctr Genom Regulat, Barcelona, Spain
[2] Univ Pompeu Fabra, Barcelona, Spain
[3] Corp Sanitaria Parc Tauli Univ Inst UAB Barcelona, Parc Tauif Fdn, Dept Oncol Res, Sabadell, Spain
[4] Inst Catalana Recerca & Estudis Avancats, Barcelona, Spain
[5] Corp Sanitaria Parc Tauli Univ Inst UAB Barcelona, Oncol Serv, Hosp Sabadell, Sabadell, Spain
基金
欧洲研究理事会;
关键词
AFFECTS CELL-PROLIFERATION; POOR-PROGNOSIS; GASTRIC-CANCER; GROWTH-ARREST; CHROMOSOMAL INSTABILITY; MESENCHYMAL TRANSITION; DECREASED EXPRESSION; ABERRANT EXPRESSION; DOWN-REGULATION; PROMOTES;
D O I
10.3389/fgene.2016.00054
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Colorectal cancer (CRC) is the fourth most common cause of death worldwide. Surgery is usually the first line of treatment for patients with CRC but many tumors with similar histopathological features show significantly different clinical outcomes. The discovery of robust prognostic biomarkers in patients with CRC is imperative to achieve more effective treatment strategies and improve patient's care. Recent progress in next generation sequencing methods and transcriptome analysis has revealed that a much larger part of the genome is transcribed into RNA than previously assumed. Collectively referred to as non-coding RNAs (ncRNAs), some of these RNA molecules such as microRNAs (miRNAs) and long non-coding RNAs (IncRNAs) have been shown to be altered and to play critical roles in tumor biology. This discovery leads to exciting possibilities for personalized cancer diagnosis, and therapy. Many IncRNAs are tissue and cancer-type specific and have already revealed to be useful as prognostic markers. In this review, we focus on recent findings concerning aberrant expression of IncRNAs in CRC tumors and emphasize their prognostic potential in CRC. Further studies focused on the mechanisms of action of IncRNAs will contribute to the development of novel biomarkers for diagnosis and disease progression.
引用
收藏
页数:14
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共 128 条
[81]   Gene Expression Signature to Improve Prognosis Prediction of Stage II and III Colorectal Cancer [J].
Salazar, Ramon ;
Roepman, Paul ;
Capella, Gabriel ;
Moreno, Victor ;
Simon, Iris ;
Dreezen, Christa ;
Lopez-Doriga, Adriana ;
Santos, Cristina ;
Marijnen, Corrie ;
Westerga, Johan ;
Bruin, Sjoerd ;
Kerr, David ;
Kuppen, Peter ;
van de Velde, Cornelis ;
Morreau, Hans ;
Van Velthuysen, Loes ;
Glas, Annuska M. ;
Van't Veer, Laura J. ;
Tollenaar, Rob .
JOURNAL OF CLINICAL ONCOLOGY, 2011, 29 (01) :17-24
[82]   Clinical Value of Prognosis Gene Expression Signatures in Colorectal Cancer: A Systematic Review [J].
Sanz-Pamplona, Rebeca ;
Berenguer, Antoni ;
Cordero, David ;
Riccadonna, Samantha ;
Sole, Xavier ;
Crous-Bou, Marta ;
Guino, Elisabet ;
Sanjuan, Xavier ;
Biondo, Sebastiano ;
Soriano, Antonio ;
Jurman, Giuseppe ;
Capella, Gabriel ;
Furlanello, Cesare ;
Moreno, Victor .
PLOS ONE, 2012, 7 (11)
[83]   Coordinated expression of ncRNAs and HOX mRNAs in the human HOXA locus [J].
Sasaki, Yasnory T. F. ;
Sano, Miho ;
Kin, Taishin ;
Asai, Kiyoshi ;
Hirose, Tetsuro .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2007, 357 (03) :724-730
[84]   GENES SPECIFICALLY EXPRESSED AT GROWTH ARREST OF MAMMALIAN-CELLS [J].
SCHNEIDER, C ;
KING, RM ;
PHILIPSON, L .
CELL, 1988, 54 (06) :787-793
[85]   Low expression of novel lncRNA RP11-462C24.1 suggests a biomarker of poor prognosis in colorectal cancer [J].
Shi, Debing ;
Zheng, Hongtu ;
Zhuo, Changhua ;
Peng, Junjie ;
Li, Dawei ;
Xu, Ye ;
Li, Xinxiang ;
Cai, Guoxiang ;
Cai, Sanjun .
MEDICAL ONCOLOGY, 2014, 31 (07)
[86]   Upregulation of the long noncoding RNA PCAT-1 correlates with advanced clinical stage and poor prognosis in esophageal squamous carcinoma [J].
Shi, Wei-hong ;
Wu, Qing-quan ;
Li, Su-qing ;
Yang, Tong-xin ;
Liu, Zi-hao ;
Tong, Yu-suo ;
Tuo, Lei ;
Wang, Shan ;
Cao, Xiu-Feng .
TUMOR BIOLOGY, 2015, 36 (04) :2501-2507
[87]   THE PVT GENE FREQUENTLY AMPLIFIES WITH MYC IN TUMOR-CELLS [J].
SHTIVELMAN, E ;
BISHOP, JM .
MOLECULAR AND CELLULAR BIOLOGY, 1989, 9 (03) :1148-1154
[88]   Current Status of Long Non-Coding RNAs in Human Cancer with Specific Focus on Colorectal Cancer [J].
Smolle, Maria ;
Uranitsch, Stefan ;
Gerger, Armin ;
Pichler, Martin ;
Haybaeck, Johannes .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2014, 15 (08) :13993-14013
[89]   The long non-coding RNA TUG1 indicates a poor prognosis for colorectal cancer and promotes metastasis by affecting epithelial-mesenchymal transition [J].
Sun, Junfeng ;
Ding, Chaohui ;
Yang, Zhen ;
Liu, Tao ;
Zhang, Xiefu ;
Zhao, Chunlin ;
Wang, Jiaxiang .
JOURNAL OF TRANSLATIONAL MEDICINE, 2016, 14
[90]   HOTAIR long non-coding RNA is a negative prognostic factor not only in primary tumors, but also in the blood of colorectal cancer patients [J].
Svoboda, Miroslav ;
Slyskova, Jana ;
Schneiderova, Michaela ;
Makovicky, Peter ;
Bielik, Ludovit ;
Levy, Miroslav ;
Lipska, Ludmila ;
Hemmelova, Beata ;
Kala, Zdenek ;
Protivankova, Marketa ;
Vycital, Ondrej ;
Liska, Vaclav ;
Schwarzova, Lucie ;
Vodickova, Ludmila ;
Vodicka, Pavel .
CARCINOGENESIS, 2014, 35 (07) :1510-1515