Defining the conserved internal architecture of a protein kinase

被引:206
作者
Kornev, Alexandr P. [1 ,2 ,3 ]
Taylor, Susan S. [1 ,3 ,4 ]
机构
[1] Univ Calif San Diego, Howard Hughes Med Inst, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, San Diego Supercomp Ctr, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2010年 / 1804卷 / 03期
关键词
Protein kinase; Structure; Phosphorylation; Hydrophobic motifs; ACTIVATION; PHOSPHORYLATION; RESIDUES;
D O I
10.1016/j.bbapap.2009.10.017
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein kinases constitute a large protein family of important regulators in all eukaryotic cells. All of the protein kinases have a similar bilobal fold, and their key structural features have been well studied. However, the recent discovery of non-contiguous hydrophobic ensembles inside the protein kinase core shed new light on the internal organization of these molecules. Two hydrophobic "spines" traverse both lobes of the protein kinase molecule, providing a firm but flexible connection between its key elements. The spine model introduces a useful framework for analysis of intramolecular communications, molecular dynamics, and drug design. Published by Elsevier B.V.
引用
收藏
页码:440 / 444
页数:5
相关论文
共 20 条
[1]   Activation loop phosphorylation and catalysis in protein kinases: Is there functional evidence for the autoinhibitor model? [J].
Adams, JA .
BIOCHEMISTRY, 2003, 42 (03) :601-607
[2]   Activation of tyrosine kinases by mutation of the gatekeeper threonine [J].
Azam, Mohammad ;
Seeliger, Markus A. ;
Gray, Nathanael S. ;
Kuriyan, John ;
Daley, George Q. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2008, 15 (10) :1109-1118
[3]   A Quantitative Comparison of Wild-Type and Gatekeeper Mutant Cdk2 for Chemical Genetic Studies with ATP Analogues [J].
Elphick, Lucy M. ;
Lee, Sarah E. ;
Child, Emma S. ;
Prasad, Aarathi ;
Pignocchi, Cristina ;
Thibaudeau, Sebastien ;
Anderson, Alexandra A. ;
Bonnac, Laurent ;
Gouverneur, Veronique ;
Mann, David J. .
CHEMBIOCHEM, 2009, 10 (09) :1519-1526
[4]   The gatekeeper residue controls autoactivation of ERK2 via a pathway of intramolecular connectivity [J].
Emrick, Michelle A. ;
Lee, Thomas ;
Starkey, Paul J. ;
Mumby, Marc C. ;
Resing, Katheryn A. ;
Ahn, Natalie G. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (48) :18101-18106
[5]   Dissection of the nucleotide and metal-phosphate binding sites in cAMP-dependent protein kinase [J].
Herberg, FW ;
Doyle, ML ;
Cox, S ;
Taylor, SS .
BIOCHEMISTRY, 1999, 38 (19) :6352-6360
[6]   Dynamics of cAMP-dependent protein kinase [J].
Johnson, DA ;
Akamine, P ;
Radzio-Andzelm, E ;
Madhusudan ;
Taylor, SS .
CHEMICAL REVIEWS, 2001, 101 (08) :2243-2270
[7]   Structural basis for control by phosphorylation [J].
Johnson, LN ;
Lewis, RJ .
CHEMICAL REVIEWS, 2001, 101 (08) :2209-2242
[8]   CRYSTAL-STRUCTURE OF THE CATALYTIC SUBUNIT OF CYCLIC ADENOSINE-MONOPHOSPHATE DEPENDENT PROTEIN-KINASE [J].
KNIGHTON, DR ;
ZHENG, JH ;
TENEYCK, LF ;
ASHFORD, VA ;
XUONG, NH ;
TAYLOR, SS ;
SOWADSKI, JM .
SCIENCE, 1991, 253 (5018) :407-414
[9]   A helix scaffold for the assembly of active protein kinases [J].
Kornev, Alexandr P. ;
Taylor, Susan S. ;
Ten Eyck, Lynn F. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (38) :14377-14382
[10]   Surface comparison of active and inactive protein kinases identifies a conserved activation mechanism [J].
Kornev, Alexandr P. ;
Haste, Nina M. ;
Taylor, Susan S. ;
Ten Eyck, Lynn F. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (47) :17783-17788