Crystal structure of Middle East respiratory syndrome coronavirus helicase

被引:89
作者
Hao, Wei [1 ,2 ]
Wojdyla, Justyna Aleksandra [3 ]
Zhao, Rong [1 ,2 ]
Han, Ruiyun [1 ,2 ]
Das, Rajat [4 ]
Zlatev, Ivan [4 ]
Manoharan, Muthiah [4 ]
Wang, Meitian [3 ]
Cui, Sheng [1 ,2 ]
机构
[1] Chinese Acad Med Sci, MOH Key Lab Syst Biol Pathogens, Inst Pathogen Biol, 9 Dong Dan San Tiao, Beijing, Peoples R China
[2] Peking Union Med Coll, 9 Dong Dan San Tiao, Beijing, Peoples R China
[3] Paul Scherrer Inst, Swiss Light Source, Villigen, Switzerland
[4] Alnylam Pharmaceut, Cambridge, MA USA
基金
中国国家自然科学基金;
关键词
ENZYMATIC-ACTIVITIES; RNA; SARS; DNA; PROTEINS; DOMAIN; UPF1; REPLICATION; SUPERFAMILY; UNDERSTAND;
D O I
10.1371/journal.ppat.1006474
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Middle East respiratory syndrome coronavirus (MERS-CoV) remains a threat to public health worldwide; however, effective vaccine or drug against CoVs remains unavailable. CoV helicase is one of the three evolutionary most conserved proteins in nidoviruses, thus making it an important target for drug development. We report here the first structure of fulllength coronavirus helicase, MERS-CoV nsp13. MERS-CoV helicase has multiple domains, including an N-terminal Cys/His rich domain (CH) with three zinc atoms, a beta-barrel domain and a C-terminal SF1 helicase core with two RecA-like subdomains. Our structural analyses show that while the domain organization of nsp13 is conserved throughout nidoviruses, the individual domains of nsp13 are closely related to the equivalent eukaryotic domains of Upf1 helicases. The most distinctive feature differentiating CoV helicases from eukaryotic Upf1 helicases is the interaction between CH domain and helicase core.
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页数:19
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共 46 条
  • [1] Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013)
    Adams, M. J.
    King, A. M. Q.
    Carstens, E. B.
    [J]. ARCHIVES OF VIROLOGY, 2013, 158 (09) : 2023 - 2030
  • [2] PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution
    Adams, Paul D.
    Afonine, Pavel V.
    Bunkoczi, Gabor
    Chen, Vincent B.
    Davis, Ian W.
    Echols, Nathaniel
    Headd, Jeffrey J.
    Hung, Li-Wei
    Kapral, Gary J.
    Grosse-Kunstleve, Ralf W.
    McCoy, Airlie J.
    Moriarty, Nigel W.
    Oeffner, Robert
    Read, Randy J.
    Richardson, David C.
    Richardson, Jane S.
    Terwilliger, Thomas C.
    Zwart, Peter H.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 : 213 - 221
  • [3] Biochemical Characterization of Middle East Respiratory Syndrome Coronavirus Helicase
    Adedeji, Adeyemi O.
    Lazarus, Hilary
    [J]. MSPHERE, 2016, 1 (05)
  • [4] Mechanism of Nucleic Acid Unwinding by SARS-CoV Helicase
    Adedeji, Adeyemi O.
    Marchand, Bruno
    te Velthuis, Aartjan J. W.
    Snijder, Eric J.
    Weiss, Susan
    Eoff, Robert L.
    Singh, Kamalendra
    Sarafianos, Stefan G.
    [J]. PLOS ONE, 2012, 7 (05): : e36521
  • [5] Molecular Mechanisms for the RNA-Dependent ATPase Activity of Upf1 and Its Regulation by Upf2
    Chakrabarti, Sutapa
    Jayachandran, Uma
    Bonneau, Fabien
    Fiorini, Francesca
    Basquin, Claire
    Domcke, Silvia
    Le Hir, Herve
    Conti, Elena
    [J]. MOLECULAR CELL, 2011, 41 (06) : 693 - 703
  • [6] Structural and functional insights into the human Upf1 helicase core
    Cheng, Zhihong
    Muhlrad, Denise
    Lim, Meng Kiat
    Parker, Roy
    Song, Haiwei
    [J]. EMBO JOURNAL, 2007, 26 (01) : 253 - 264
  • [7] Unusual bipartite mode of interaction between the nonsense-mediated decay factors, UPF1 and UPF2
    Clerici, Marcello
    Mourao, Andre
    Gutsche, Irina
    Gehring, Niels H.
    Hentze, Matthias W.
    Kulozik, Andreas
    Kadlec, Jan
    Sattler, Michael
    Cusack, Stephen
    [J]. EMBO JOURNAL, 2009, 28 (15) : 2293 - 2306
  • [8] Coronaviruses: Important Emerging Human Pathogens
    Coleman, Christopher M.
    Frieman, Matthew B.
    [J]. JOURNAL OF VIROLOGY, 2014, 88 (10) : 5209 - 5212
  • [9] The C-terminal regulatory domain is the RNA 5′-triphosphate sensor of RIG-I
    Cui, Sheng
    Eisenaecher, Katharina
    Kirchhofer, Axel
    Brzozka, Krzysztof
    Lammens, Alfred
    Lammens, Katja
    Fujita, Takashi
    Conzelmann, Karl-Klaus
    Krug, Anne
    Hopfner, Karl-Peter
    [J]. MOLECULAR CELL, 2008, 29 (02) : 169 - 179
  • [10] Middle East respiratory syndrome (MERS) A new zoonotic viral pneumonia
    Cunha, Cheston B.
    Opal, Steven M.
    [J]. VIRULENCE, 2014, 5 (06) : 650 - 654