ThiD-TenA: A gene pair fusion in eukaryotes

被引:7
作者
Ouzounis, CA
Kyrpides, NC
机构
[1] SRI Int, Ctr Artificial Intelligence, Menlo Park, CA 94025 USA
[2] Univ Illinois, Dept Microbiol, Urbana, IL 61801 USA
关键词
gene fusion; ThiD; function prediction; transcription; phylogeny;
D O I
10.1007/PL00013145
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Computational analysis of the hypothetical open reading frame MJ0236 from Methanococcus jannaschii reveals its membership to a family of bacterial and eukaryotic proteins, predicted to be the HMP-P kinases involved in thiamin biosyntheis (ThiD). The eukaryotic members of this family contain a C-terminal extension similar to a bacterial transcriptional activator (TenA), thus pointing to a fusion event that took place during cellular evolution. The C-terminal domain is absent from M. jannaschii. The significance of this observation is two-fold: first, this is a case where a fusion protein contains two domains with an unusual phylogenetic distribution, and second, the TenA domain is a rare case of a gene family involved in transcription present both in bacteria and eukaryotes.
引用
收藏
页码:708 / 711
页数:4
相关论文
共 14 条
[1]   Molecular cloning of thi-4, a gene necessary for the biosynthesis of thiamine in Neurospora crassa [J].
Akiyama, M ;
Nakashima, H .
CURRENT GENETICS, 1996, 30 (01) :62-67
[2]   IDENTIFICATION AND ANALYSIS OF THE RHIZOBIUM-MELILOTI EXOAMONP GENES INVOLVED IN EXOPOLYSACCHARIDE BIOSYNTHESIS AND MAPPING OF PROMOTERS LOCATED ON THE EXOHKLAMONP FRAGMENT [J].
BECKER, A ;
KLEICKMANN, A ;
KELLER, M ;
ARNOLD, W ;
PUHLER, A .
MOLECULAR & GENERAL GENETICS, 1993, 241 (3-4) :367-379
[3]   FROM GENOME SEQUENCES TO PROTEIN FUNCTION [J].
BORK, P ;
OUZOUNIS, C ;
SANDER, C .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (03) :393-403
[4]   Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii [J].
Bult, CJ ;
White, O ;
Olsen, GJ ;
Zhou, LX ;
Fleischmann, RD ;
Sutton, GG ;
Blake, JA ;
FitzGerald, LM ;
Clayton, RA ;
Gocayne, JD ;
Kerlavage, AR ;
Dougherty, BA ;
Tomb, JF ;
Adams, MD ;
Reich, CI ;
Overbeek, R ;
Kirkness, EF ;
Weinstock, KG ;
Merrick, JM ;
Glodek, A ;
Scott, JL ;
Geoghagen, NSM ;
Weidman, JF ;
Fuhrmann, JL ;
Nguyen, D ;
Utterback, TR ;
Kelley, JM ;
Peterson, JD ;
Sadow, PW ;
Hanna, MC ;
Cotton, MD ;
Roberts, KM ;
Hurst, MA ;
Kaine, BP ;
Borodovsky, M ;
Klenk, HP ;
Fraser, CM ;
Smith, HO ;
Woese, CR ;
Venter, JC .
SCIENCE, 1996, 273 (5278) :1058-1073
[5]   WHOLE-GENOME RANDOM SEQUENCING AND ASSEMBLY OF HAEMOPHILUS-INFLUENZAE RD [J].
FLEISCHMANN, RD ;
ADAMS, MD ;
WHITE, O ;
CLAYTON, RA ;
KIRKNESS, EF ;
KERLAVAGE, AR ;
BULT, CJ ;
TOMB, JF ;
DOUGHERTY, BA ;
MERRICK, JM ;
MCKENNEY, K ;
SUTTON, G ;
FITZHUGH, W ;
FIELDS, C ;
GOCAYNE, JD ;
SCOTT, J ;
SHIRLEY, R ;
LIU, LI ;
GLODEK, A ;
KELLEY, JM ;
WEIDMAN, JF ;
PHILLIPS, CA ;
SPRIGGS, T ;
HEDBLOM, E ;
COTTON, MD ;
UTTERBACK, TR ;
HANNA, MC ;
NGUYEN, DT ;
SAUDEK, DM ;
BRANDON, RC ;
FINE, LD ;
FRITCHMAN, JL ;
FUHRMANN, JL ;
GEOGHAGEN, NSM ;
GNEHM, CL ;
MCDONALD, LA ;
SMALL, KV ;
FRASER, CM ;
SMITH, HO ;
VENTER, JC .
SCIENCE, 1995, 269 (5223) :496-512
[6]   BACILLUS-SUBTILIS GENOME PROJECT - CLONING AND SEQUENCING OF THE 97KB REGION FROM 325-DEGREES TO 333 DEGREES [J].
GLASER, P ;
KUNST, F ;
ARNAUD, M ;
COUDART, MP ;
GONZALES, W ;
HULLO, MF ;
IONESCU, M ;
LUBOCHINSKY, B ;
MARCELINO, L ;
MOSZER, I ;
PRESECAN, E ;
SANTANA, M ;
SCHNEIDER, E ;
SCHWEIZER, J ;
VERTES, A ;
RAPOPORT, G ;
DANCHIN, A .
MOLECULAR MICROBIOLOGY, 1993, 10 (02) :371-384
[7]  
Itoh T, 1996, DNA Res, V3, P379, DOI 10.1093/dnares/3.6.379
[8]  
Kyrpides N C, 1996, Microb Comp Genomics, V1, P329
[9]  
NOSAKA K, 1994, J BIOL CHEM, V269, P30510
[10]   The emergence of major cellular processes in evolution [J].
Ouzounis, C ;
Kyrpides, N .
FEBS LETTERS, 1996, 390 (02) :119-123