Hydrogen bonding effect on the structure and vibrational spectra of complementary pairs of nucleic acid bases. I. Adenine-uracil

被引：9

作者：

Ten, G. N. ^{[1
]}

Nechaev, V. V. ^{[1
]}

Pankratov, A. N. ^{[1
]}

Baranov, V. I. ^{[2
]}

机构：

[1] NG Chernyshevskii Saratov State Univ, Saratov, Russia

[2] Russian Acad Sci, VI Vernadsky Inst Geochem & Analyt Chem, Moscow 117901, Russia

来源：

JOURNAL OF STRUCTURAL CHEMISTRY | 2010年 / 51卷 / 03期

关键词：

adenine; uracil; complementary pair; vibrational spectra; hydrogen bonding; interpretation; EXPERIMENTAL-MATRIX-ISOLATION; INFRARED-SPECTRA; AB-INITIO; MOLECULAR-STRUCTURE; COMPLEXES; THYMINE; PURINE; 2-CHLOROADENINE; CONSTITUENTS; TAUTOMERISM;

D O I：

10.1007/s10947-010-0067-2

中图分类号：

O61 [无机化学];

学科分类号：

070301 ; 081704 ;

摘要：

Vibrational spectra of the adenine-uracil complementary pair of nucleic acid bases (NAB) in the isolated state are calculated in the B3LYP/6-311++G(d,p) approximation and analyzed. The hydrogen bonding effect on frequency positions and intensities of normal vibrations of NAB pairs is shown in comparison with isolated uracil and adenine molecules.

引用

页码：453 / 462

页数：10

共 30 条

[1] Hydrogen bonding effect on the structure and vibrational spectra of complementary pairs of nucleic acid bases. I. Adenine-uracil
G. N. Ten
V. V. Nechaev
A. N. Pankratov
V. I. Baranov
Journal of Structural Chemistry, 2010, 51 : 453 - 462
[2] Effect of hydrogen bonding on the structure and vibrational spectra of the complementary pairs of nucleic acid bases. II. adenine-thymine
G. N. Ten
V. V. Nechaev
A. N. Pankratov
V. I. Berezin
V. I. Baranov
Journal of Structural Chemistry, 2010, 51 : 854 - 861
[3] Effect of hydrogen bonding on the structure and vibrational spectra of the complementary pairs of nucleic acid bases. II. adenine-thymine
Ten, G. N.
Nechaev, V. V.
Pankratov, A. N.
Berezin, V. I.
Baranov, V. I.
JOURNAL OF STRUCTURAL CHEMISTRY, 2010, 51 (05) : 854 - 861
[4] Hydrogen bond effect on the structure and vibrational spectra of complementary pairs of nucleic acid bases. III. Guanine-cytosine
G. N. Ten
A. A. Yakovleva
V. V. Nechaev
V. I. Baranov
Journal of Structural Chemistry, 2012, 53 : 835 - 844
[5] Hydrogen bond effect on the structure and vibrational spectra of complementary pairs of nucleic acid bases. III. Guanine-cytosine
Ten, G. N.
Yakovleva, A. A.
Nechaev, V. V.
Baranov, V. I.
JOURNAL OF STRUCTURAL CHEMISTRY, 2012, 53 (05) : 835 - 844
[6] Adenine-uracil dinucleotide and the structure of yeast nucleic acid.
Jones, W
Read, BE
JOURNAL OF BIOLOGICAL CHEMISTRY, 1917, 29 (01) : 111 - 122
[7] Calculation and analysis of vibrational spectra of adenine-thymine, guanine-cytosine, and adenine-uracil complementary pairs in the condensed state
Ten, G. N.
Burova, T. G.
Baranov, V. I.
JOURNAL OF APPLIED SPECTROSCOPY, 2009, 76 (01) : 73 - 81
[8] Mutual Relations between Substituent Effect, Hydrogen Bonding, and Aromaticity in Adenine-Uracil and Adenine-Adenine Base Pairs
Wieczorkiewicz, Pawel A.
Szatylowicz, Halina
Krygowski, Tadeusz M.
MOLECULES, 2020, 25 (16):
[9] Calculation and analysis of vibrational spectra of adenine–thymine, guanine–cytosine, and adenine–uracil complementary pairs in the condensed state
G. N. Ten
T. G. Burova
V. I. Baranov
Journal of Applied Spectroscopy, 2009, 76 : 73 - 81
[10] An ab initio study on the hydrogen bond energies of nucleic acid basepairs:: Adenine-uracil Watson-Crick and guanine-uracil wobble basepairs
Kawahara, S
Uchimaru, T
HETEROCYCLES, 2000, 52 (03) : 1047 - +

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