Relationships observed in the structure and spectra of uracil and its 5-substituted derivatives

被引:38
作者
Alcolea Palafox, M. [2 ]
Tardajos, G. [2 ]
Guerrero-Martinez, A. [2 ]
Vats, J. K. [1 ]
Joe, Hubert [3 ]
Rastogi, V. K. [1 ]
机构
[1] CCS Univ, Dept Phys, Meerut 250004, Uttar Pradesh, India
[2] Univ Complutense, Fac Ciencias Quim, Dept Quim Fis 1, E-28040 Madrid, Spain
[3] Univ Kerala, Dept Phys, Mar Ivanios Coll, Trivandrum 695581, Kerala, India
关键词
5-Substituted uracil; IR and Raman spectra; Vibrational wavenumbers; Geometry; DENSITY-FUNCTIONAL COMPUTATIONS; NUCLEIC-ACID CONSTITUENTS; HYDROGEN-BONDED COMPLEXES; FT-RAMAN SPECTRA; VIBRATIONAL-SPECTRA; MATRIX-ISOLATION; AB-INITIO; INFRARED-SPECTRA; MOLECULAR-GEOMETRY; ANTITUMOR-ACTIVITY;
D O I
10.1016/j.saa.2009.12.042
中图分类号
O433 [光谱学];
学科分类号
0703 ; 070302 ;
摘要
The effects on the geometry structure, atomic charges and vibrational wavenumbers of the main different substituents in the 5th position of the uracil ring were analysed, and relationships were established. The 5-monosubstituted derivatives studied were 5-XU (X = F, Cl, Br, I, CH3, NH2, NO2). The geometry and vibrational wavenumbers were determined in these molecules. The FT-IR and Raman spectra were studied with the support of B3LYP calculations using several basis sets. Several general conclusions were underlined. (C) 2010 Elsevier B.V. All rights reserved.
引用
收藏
页码:1261 / 1269
页数:9
相关论文
共 103 条
  • [51] Synthesis, characterization and antitumour activity of 5-chlorouracil and 5-chlorouracil-histidine complexes with some metal(III) ions
    Narang, KK
    Singh, VP
    Bhattacharya, D
    [J]. SYNTHESIS AND REACTIVITY IN INORGANIC AND METAL-ORGANIC CHEMISTRY, 1998, 28 (01): : 37 - 49
  • [52] Infrared matrix isolation spectra of 1-methyluracil revised assignment based on the Hartree-Fock and post-Hartree-Fock studies
    Nowak, MJ
    Lapinski, L
    Bienko, DC
    Michalska, D
    [J]. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 1997, 53 (06) : 855 - 865
  • [53] Bactericidal effect of combinations of antibiotic and antineoplastic agents against Staphylococcus aureus and Escherichia coli
    Nyhlén, A
    Ljungberg, B
    Nilsson-Ehle, I
    Odenholt, I
    [J]. CHEMOTHERAPY, 2002, 48 (02) : 71 - 77
  • [54] Binding of 5-bromouracil-containing S/MAR DNA to the nuclear matrix
    Ogino, H
    Fujii, M
    Satou, W
    Suzuki, T
    Michishita, E
    Ayusawa, D
    [J]. DNA RESEARCH, 2002, 9 (01) : 25 - 29
  • [55] Tautomerism of 1-methyl derivatives of uracil, thymine, and 5-bromouracil.: Is tautomerism the basis for the mutagenicity of 5-bromouridine?
    Orozco, M
    Hernández, B
    Luque, FJ
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (26) : 5228 - 5233
  • [56] CRYSTAL STRUCTURE OF THYMINE
    OZEKI, K
    SAKABE, N
    TANAKA, J
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL CRYSTALLOGRAPHY AND CRYSTAL CHEMISTRY, 1969, B 25 : 1038 - &
  • [57] FT-IR, FT-Raman spectra, density functional computations of the vibrational spectra and molecular geometry of biomolecule 5-aminouracil
    Palafox, M. Alcolea
    Tardajos, G.
    Guerrero-Martinez, A.
    Rastogi, V. K.
    Mishra, D.
    Ojha, S. P.
    Kiefer, W.
    [J]. CHEMICAL PHYSICS, 2007, 340 (1-3) : 17 - 31
  • [58] The hydration effect on the uracil frequencies: an experimental and quantum chemical study
    Palafox, MA
    Iza, N
    Gil, M
    [J]. JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2002, 585 : 69 - 92
  • [59] Accurate scaling of the vibrational spectra of aniline and several derivatives
    Palafox, MA
    Núñez, JL
    Gil, M
    [J]. JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2002, 593 : 101 - 131
  • [60] Quantum chemical predictions of the vibrational spectra of polyatomic molecules. The uracil molecule and two derivatives
    Palafox, MA
    Rastogi, VK
    [J]. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2002, 58 (03) : 411 - 440