A U-Tetrad Stabilizes Human Telomeric RNA G-Quadruplex Structure

被引:47
|
作者
Xu, Yan [1 ]
Ishizuka, Takumi [1 ]
Kimura, Takashi [1 ]
Komiyama, Makoto [1 ]
机构
[1] Univ Tokyo, Adv Sci & Technol Res Ctr, Meguro Ku, Tokyo 1538904, Japan
关键词
CRYSTAL-STRUCTURE; BINDING; CONFORMATION; PROMOTER; FORMS; IONS;
D O I
10.1021/ja909708a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Telomeric repeat-containing RNA is a new noncoding RNA molecule recently discovered in mammalian cells. Here we report the structural features of human telomere RNA r(UAGGGU) in the presence of K+ and Na+. We demonstrated for the first time that a novel U-tetrad is formed at the 3' end of a parallel human telomeric RNA G-quadruplex. The U-tetrad dramatically stabilizes human telomeric RNA G-quadruplex structure, leading to an increase in melting temperature (T-m) of 29 degrees C. The U-tetrad-stabilized telomeric RNA G-quadruplex structure adds considerably to our understanding of the diversity of RNA G-quadruplex architectures. It shows that the structure of base "quartets" is important in RNA assembly. The structural information will be invaluable for understanding the function of human telomere RNA.
引用
收藏
页码:7231 / +
页数:4
相关论文
共 50 条
  • [1] Human telomeric G-quadruplex: structures of DNA and RNA sequences
    Phan, Anh Tuan
    FEBS JOURNAL, 2010, 277 (05) : 1107 - 1117
  • [2] Human telomeric G-quadruplex: thermodynamic and kinetic studies of telomeric quadruplex stability
    Chaires, Jonathan B.
    FEBS JOURNAL, 2010, 277 (05) : 1098 - 1106
  • [3] Structure of Human Telomeric RNA (TERRA): Stacking of Two G-Quadruplex Blocks in K+ Solution
    Martadinata, Herry
    Phan, Anh Tuan
    BIOCHEMISTRY, 2013, 52 (13) : 2176 - 2183
  • [4] Specific G-quadruplex structure recognition of human telomeric RNA over DNA by a fluorescently activated hyperporphyrin
    Wang, Ying
    Hu, Yuehua
    Wu, Tao
    Liu, Hua
    Zhang, Lihua
    Zhou, Xiaoshun
    Shao, Yong
    ANALYST, 2015, 140 (15) : 5169 - 5175
  • [5] Molecular Recognition of the Hybrid-2 Human Telomeric G-Quadruplex by Epiberberine: Insights into Conversion of Telomeric G-Quadruplex Structures
    Lin, Clement
    Wu, Guanhui
    Wang, Kaibo
    Onel, Buket
    Sakai, Saburo
    Shao, Yong
    Yang, Danzhou
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2018, 57 (34) : 10888 - 10893
  • [6] Recognize three different human telomeric G-quadruplex conformations by quinacrine
    Sun, Hongxia
    Xiang, Junfeng
    Li, Qian
    Liu, Yan
    Li, Lin
    Shang, Qian
    Xu, Guangzhi
    Tang, Yalin
    ANALYST, 2012, 137 (04) : 862 - 867
  • [7] Identification of novel interactors of human telomeric G-quadruplex DNA
    Pagano, Bruno
    Margarucci, Luigi
    Zizza, Pasquale
    Amato, Jussara
    Iaccarino, Nunzia
    Cassiano, Chiara
    Salvati, Erica
    Novellino, Ettore
    Biroccio, Annamaria
    Casapullo, Agostino
    Randazzo, Antonio
    CHEMICAL COMMUNICATIONS, 2015, 51 (14) : 2964 - 2967
  • [8] Disordering of Human Telomeric G-Quadruplex with Novel Antiproliferative Anthrathiophenedione
    Kaluzhny, Dmitry
    Ilyinsky, Nikolay
    Shchekotikhin, Andrei
    Sinkevich, Yuri
    Tsvetkov, Philipp O.
    Tsvetkov, Vladimir
    Veselovsky, Alexander
    Livshits, Mikhail
    Borisova, Olga
    Shtil, Alexander
    Shchyolkina, Anna
    PLOS ONE, 2011, 6 (11):
  • [9] Structure and Stability of Human Telomeric G-Quadruplex with Preclinical 9-Amino Acridines
    Ferreira, Ruben
    Artali, Roberto
    Benoit, Adam
    Gargallo, Raimundo
    Eritja, Ramon
    Ferguson, David M.
    Sham, Yuk Y.
    Mazzini, Stefania
    PLOS ONE, 2013, 8 (03):
  • [10] Telomeric G-Quadruplex Architecture and Interactions with Potential Drugs
    Sissi, Claudia
    Palumbo, Manlio
    CURRENT PHARMACEUTICAL DESIGN, 2014, 20 (41) : 6489 - 6509