Assessing the utility of statistical adjustments for imperfect detection in tropical conservation science

被引:122
作者
Banks-Leite, Cristina [1 ,2 ]
Pardini, Renata [3 ]
Boscolo, Danilo [4 ]
Cassano, Camila Righetto [2 ,5 ]
Puettker, Thomas [3 ]
Barros, Camila Santos [2 ]
Barlow, Jos [6 ,7 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Grand Challenges Ecosyst & Environm, Dept Life Sci, Ascot SL5 7PY, Berks, England
[2] Univ Sao Paulo, Dept Ecol, Inst Biociencias, BR-05508090 Sao Paulo, Brazil
[3] Univ Sao Paulo, Dept Zool, Inst Biociencias, BR-05508090 Sao Paulo, Brazil
[4] Univ Sao Paulo, Dept Biol, Fac Filosofia Ciencias & Letras Ribeirao Preto, BR-14040901 Ribeirao Preto, Brazil
[5] Univ Estadual Santa Cruz, Dept Ciencias Biol, BR-45662900 Ilheus, BA, Brazil
[6] Univ Lancaster, Lancaster Environm Ctr, Lancaster LA1 4YQ, England
[7] Museu Paraense Emilio Goeldi, BR-66040170 Belem, Para, Brazil
基金
巴西圣保罗研究基金会; 英国自然环境研究理事会;
关键词
biodiversity conservation; capture-recapture models; detectability; detection probability; imperfect detection; monitoring; occupancy models; species richness; ESTIMATING SITE OCCUPANCY; DETECTION PROBABILITY; ESTIMATING ABUNDANCE; LANDSCAPE STRUCTURE; SPECIES RICHNESS; BIODIVERSITY; BIRD; EXTINCTION; MANAGEMENT; SECONDARY;
D O I
10.1111/1365-2664.12272
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
1. In recent years, there has been a fast development of models that adjust for imperfect detection. These models have revolutionized the analysis of field data, and their use has repeatedly demonstrated the importance of sampling design and data quality. There are, however, several practical limitations associated with the use of detectability models which restrict their relevance to tropical conservation science. 2. We outline the main advantages of detectability models, before examining their limitations associated with their applicability to the analysis of tropical communities, rare species and large-scale data sets. Finally, we discuss whether detection probability needs to be controlled before and/or after data collection. 3. Models that adjust for imperfect detection allow ecologists to assess data quality by estimating uncertainty and to obtain adjusted ecological estimates of populations and communities. Importantly, these models have allowed informed decisions to be made about the conservation and management of target species. 4. Data requirements for obtaining unadjusted estimates are substantially lower than for detectability-adjusted estimates, which require relatively high detection/recapture probabilities and a number of repeated surveys at each location. These requirements can be difficult to meet in large-scale environmental studies where high levels of spatial replication are needed, or in the tropics where communities are composed of many naturally rare species. However, while imperfect detection can only be adjusted statistically, covariates of detection probability can also be controlled through study design. Using three study cases where we controlled for covariates of detection probability through sampling design, we show that the variation in unadjusted ecological estimates from nearly 100 species was qualitatively the same as that obtained from adjusted estimates. Finally, we discuss that the decision as to whether one should control for covariates of detection probability through study design or statistical analyses should be dependent on study objectives. 5. Synthesis and applications. Models that adjust for imperfect detection are an important part of an ecologist's toolkit, but they should not be uniformly adopted in all studies. Ecologists should never let the constraints of models dictate which questions should be pursued or how the data should be analysed, and detectability models are no exception. We argue for pluralism in scientific methods, particularly where cost-effective applied ecological science is needed to inform conservation policy at a range of different scales and in many different systems.
引用
收藏
页码:849 / 859
页数:11
相关论文
共 56 条
  • [1] [Anonymous], 2002, Model selection and multimodel inference: a practical informationtheoretic approach
  • [2] [Anonymous], 2005, EC HUM WELLB BIOD SY
  • [3] [Anonymous], 1996, NEOTROPICAL BIRDS EC
  • [4] When can we ignore the problem of imperfect detection in comparative studies?
    Archaux, Frederic
    Henry, Pierre-Yves
    Gimenez, Olivier
    [J]. METHODS IN ECOLOGY AND EVOLUTION, 2012, 3 (01): : 188 - 194
  • [5] Estimating site occupancy and species detection probability parameters for terrestrial salamanders
    Bailey, LL
    Simons, TR
    Pollock, KH
    [J]. ECOLOGICAL APPLICATIONS, 2004, 14 (03) : 692 - 702
  • [6] Unraveling the drivers of community dissimilarity and species extinction in fragmented landscapes
    Banks-Leite, Cristina
    Ewers, Robert M.
    Metzger, Jean Paul
    [J]. ECOLOGY, 2012, 93 (12) : 2560 - 2569
  • [7] Decisions on Temporal Sampling Protocol Influence the Detection of Ecological Patterns
    Banks-Leite, Cristina
    Ewers, Robert M.
    Pimentel, Rafael G.
    Metzger, Jean Paul
    [J]. BIOTROPICA, 2012, 44 (03) : 378 - 385
  • [8] Comparing species and measures of landscape structure as indicators of conservation importance
    Banks-Leite, Cristina
    Ewers, Robert M.
    Kapos, Valerie
    Martensen, Alexandre C.
    Metzger, Jean Paul
    [J]. JOURNAL OF APPLIED ECOLOGY, 2011, 48 (03) : 706 - 714
  • [9] Quantifying the biodiversity value of tropical primary, secondary, and plantation forests
    Barlow, J.
    Gardner, T. A.
    Araujo, I. S.
    Avila-Pires, T. C.
    Bonaldo, A. B.
    Costa, J. E.
    Esposito, M. C.
    Ferreira, L. V.
    Hawes, J.
    Hernandez, M. M.
    Hoogmoed, M. S.
    Leite, R. N.
    Lo-Man-Hung, N. F.
    Malcolm, J. R.
    Martins, M. B.
    Mestre, L. A. M.
    Miranda-Santos, R.
    Nunes-Gutjahr, A. L.
    Overal, W. L.
    Parry, L.
    Peters, S. L.
    Ribeiro-Junior, M. A.
    da Silva, M. N. F.
    Motta, C. da Silva
    Peres, C. A.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (47) : 18555 - 18560
  • [10] The value of primary, secondary and plantation forests for fruit-feeding butterflies in the Brazilian Amazon
    Barlow, Jos
    Overal, William L.
    Araujo, Ivanei S.
    Gardner, Toby A.
    Peres, Carlos A.
    [J]. JOURNAL OF APPLIED ECOLOGY, 2007, 44 (05) : 1001 - 1012