Systems immunology: just getting started

被引:149
作者
Davis, Mark M. [1 ,2 ]
Tato, Cristina M. [2 ]
Furman, David [2 ,3 ]
机构
[1] Stanford Univ, Howard Hughes Med Inst, Sch Med, Stanford, CA 94305 USA
[2] Stanford Univ, Inst Immun Transplantat & Infect, Sch Med, Stanford, CA 94305 USA
[3] Jose de San Martin Clin Hosp, Natl Sci & Tech Res Council, Inst Immunogenet, Buenos Aires, DF, Argentina
基金
美国国家卫生研究院;
关键词
SEASONAL INFLUENZA; MASS CYTOMETRY; CELL SUBSETS; GENETIC-BASIS; IMMUNE; EXPRESSION; VACCINATION; RESPONSES; SIGNATURES; DECONVOLUTION;
D O I
10.1038/ni.3768
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Systems-biology approaches in immunology take various forms, but here we review strategies for measuring a broad swath of immunological functions as a means of discovering previously unknown relationships and phenomena and as a powerful way of understanding the immune system as a whole. This approach has rejuvenated the field of vaccine development and has fostered hope that new ways will be found to combat infectious diseases that have proven refractory to classical approaches. Systems immunology also presents an important new strategy for understanding human immunity directly, taking advantage of the many ways the immune system of humans can be manipulated.
引用
收藏
页码:725 / 732
页数:8
相关论文
共 83 条
[1]   Phagocytosis and the inflammatory response [J].
Aderem, A .
JOURNAL OF INFECTIOUS DISEASES, 2003, 187 :S340-S345
[2]  
Andres-Terre M, 2015, IMMUNITY, V43, P1199, DOI 10.1016/j.immuni.2015.11.003
[3]  
[Anonymous], 1963, Soviet Math
[4]   Personalized Immunomonitoring Uncovers Molecular Networks that Stratify Lupus Patients [J].
Banchereau, Romain ;
Hong, Seunghee ;
Cantarel, Brandi ;
Baldwin, Nicole ;
Baisch, Jeanine ;
Edens, Michelle ;
Cepika, Alma-Martina ;
Acs, Peter ;
Turner, Jacob ;
Anguiano, Esperanza ;
Vinod, Parvathi ;
Kahn, Shaheen ;
Obermoser, Gerlinde ;
Blankenship, Derek ;
Wakeland, Edward ;
Nassi, Lorien ;
Gotte, Alisa ;
Punaro, Marilynn ;
Liu, Yong-Jun ;
Banchereau, Jacques ;
Rossello-Urgell, Jose ;
Wright, Tracey ;
Pascual, Virginia .
CELL, 2016, 165 (03) :551-565
[5]   Functional heterogeneity of human memory CD4+ T cell clones primed by pathogens or vaccines [J].
Becattini, Simone ;
Latorre, Daniela ;
Mele, Federico ;
Foglierini, Mathilde ;
De Gregorio, Corinne ;
Cassotta, Antonino ;
Fernandez, Blanca ;
Kelderman, Sander ;
Schumacher, Ton N. ;
Corti, Davide ;
Lanzavecchia, Antonio ;
Sallusto, Federica .
SCIENCE, 2015, 347 (6220) :400-406
[6]  
Bendall S. C., 2012, NAT BIOTECHNOL, V6, P39
[7]   Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum [J].
Bendall, Sean C. ;
Simonds, Erin F. ;
Qiu, Peng ;
Amir, El-ad D. ;
Krutzik, Peter O. ;
Finck, Rachel ;
Bruggner, Robert V. ;
Melamed, Rachel ;
Trejo, Angelica ;
Ornatsky, Olga I. ;
Balderas, Robert S. ;
Plevritis, Sylvia K. ;
Sachs, Karen ;
Pe'er, Dana ;
Tanner, Scott D. ;
Nolan, Garry P. .
SCIENCE, 2011, 332 (6030) :687-696
[8]   Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy [J].
Blazkova, Jana ;
Gupta, Sarthak ;
Liu, Yudong ;
Gaudilliere, Brice ;
Ganio, Edward A. ;
Bolen, Christopher R. ;
Saar-Dover, Ron ;
Fragiadakis, Gabriela K. ;
Angst, Martin S. ;
Hasni, Sarfaraz ;
Aghaeepour, Nima ;
Stevenson, David ;
Baldwin, Nicole ;
Anguiano, Esperanza ;
Chaussabel, Damien ;
Altman, Matthew C. ;
Kaplan, Mariana J. ;
Davis, Mark M. ;
Furman, David .
JOURNAL OF IMMUNOLOGY, 2017, 198 (06) :2479-2488
[9]   Measurement and Clinical Monitoring of Human Lymphocyte Clonality by Massively Parallel V-D-J Pyrosequencing [J].
Boyd, Scott D. ;
Marshall, Eleanor L. ;
Merker, Jason D. ;
Maniar, Jay M. ;
Zhang, Lyndon N. ;
Sahaf, Bita ;
Jones, Carol D. ;
Simen, Birgitte B. ;
Hanczaruk, Bozena ;
Nguyen, Khoa D. ;
Nadeau, Kari C. ;
Egholm, Michael ;
Miklos, David B. ;
Zehnder, James L. ;
Fire, Andrew Z. .
SCIENCE TRANSLATIONAL MEDICINE, 2009, 1 (12)
[10]   Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences [J].
Brodin, Petter ;
Jojic, Vladimir ;
Gao, Tianxiang ;
Bhattacharya, Sanchita ;
Angel, Cesar J. Lopez ;
Furman, David ;
Shen-Orr, Shai ;
Dekker, Cornelia L. ;
Swan, Gary E. ;
Butte, Atul J. ;
Maecker, Holden T. ;
Davis, Mark M. .
CELL, 2015, 160 (1-2) :37-47