Exploring Molecular Interactions between Escherichia coli RNA Polymerase and Topoisomerase I by Molecular Simulations

被引:0
|
作者
Tiwari, Purushottam [1 ]
Chapagain, Prem [2 ]
Banda, Srikanth [2 ]
Darici, Yesim [2 ]
Tse-Dinh, Yuk-Ching [2 ]
Ueren, Aykut [1 ]
机构
[1] Georgetown Univ, Washington, DC USA
[2] Florida Int Univ, Miami, FL 33199 USA
基金
美国国家卫生研究院;
关键词
D O I
10.1016/j.bpj.2016.11.1555
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
1408-Pos
引用
收藏
页码:287A / 287A
页数:1
相关论文
共 50 条
  • [1] Characterization of molecular interactions between Escherichia coli RNA polymerase and topoisomerase I by molecular simulations
    Tiwari, Purushottam B.
    Chapagain, Prem P.
    Banda, Srikanth
    Darici, Yesim
    Uren, Aykut
    Tse-Dinh, Yuk-Ching
    FEBS LETTERS, 2016, 590 (17): : 2844 - 2851
  • [2] Direct interaction between Escherichia coli RNA polymerase and the zinc ribbon domains of DNA topoisomerase I
    Cheng, BK
    Zhu, CX
    Ji, CL
    Ahumada, A
    Tse-Dinh, YC
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (33) : 30705 - 30710
  • [3] Molecular Interaction between Escherichia Coli Topoisomerase I and pBAD/Thio Supercoiled Plasmid DNA
    Tiwari, Purushottam
    Annamalai, Thirunavukkarasu
    Cheng, Bokun
    Narula, Gagandeep
    Wang, Xuewen
    Tse-Dinh, Yuk-Ching
    He, Jin
    Darici, Yesim
    BIOPHYSICAL JOURNAL, 2015, 108 (02) : 398A - 398A
  • [4] Molecular interactions between poly(ADP-ribose) polymerase (PARP I) and topoisomerase I (Topo I): identification of topology of binding
    Bauer, PI
    Chen, HJ
    Kenesi, E
    Kenessey, I
    Buki, KG
    Kirsten, E
    Hakam, A
    Hwang, JI
    Kun, E
    FEBS LETTERS, 2001, 506 (03) : 239 - 242
  • [5] Escherichia coli FtsZ molecular dynamics simulations
    Muthukumar, Vidyalakshmi C.
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2024, 42 (05): : 2653 - 2666
  • [6] Insights into the DNA and RNA Interactions of Human Topoisomerase III Beta Using Molecular Dynamics Simulations
    Mamun, Yasir
    Tse-Dinh, Yuk-Ching
    Chapagain, Prem
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2024, 64 (15) : 6062 - 6071
  • [7] Characterization of interactions between Escherichia coli molecular chaperones and immobilized caseins
    Nam, SH
    Walsh, MK
    PREPARATIVE BIOCHEMISTRY & BIOTECHNOLOGY, 2003, 33 (04): : 321 - 339
  • [8] Interactions between RNA polymerase and the positive and negative regulators of transcription at the Escherichia coli gal operon
    DalmaWeiszhausz, DD
    Brenowitz, M
    BIOCHEMISTRY, 1996, 35 (12) : 3735 - 3745
  • [9] Molecular Structures of Transcribing RNA Polymerase I
    Tafur, Lucas
    Sadian, Yashar
    Hoffmann, Niklas A.
    Jakobi, Arjen J.
    Wetzel, Rene
    Hagen, Wim J. H.
    Sachse, Carsten
    Mueller, Christoph W.
    MOLECULAR CELL, 2016, 64 (06) : 1135 - 1143
  • [10] RNA polymerase I: A multifunctional molecular machine
    Haag, Jeremy R.
    Pikaard, Craig S.
    CELL, 2007, 131 (07) : 1224 - 1225