Web-based interface for the visualization of microarray data

被引:0
作者
Vanteru, B. [1 ]
Shaik, J. [1 ]
Yeasin, M. [1 ]
机构
[1] Univ Memphis, Comp Vis Pattern & Image Anal Lab, Memphis, TN 38152 USA
来源
ADVANCES IN VISUAL COMPUTING, PT 1 | 2006年 / 4291卷
关键词
data projection; Web-based interface; coordinate-based & axis-based visualization; dimensionality reduction and data integration;
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
This paper presents the design and development of a web-based interface for the visualization of high dimensional data such as microarray data. A co-ordinate based method, namely, 3D Star Coordinate (3SC) projection technique is used for the visualization. The proposed web-based interface enables the user to choose an existing dataset from the database or upload a dataset and visualize the best possible projection of the data on an applet running on the client web browser. The proposed projection algorithm runs in Matlab at the server side for faster computation and using Java Serviets the results are delivered to the client machine.
引用
收藏
页码:813 / +
页数:4
相关论文
共 27 条
  • [1] [Anonymous], Pattern Recognition With Fuzzy Objective Function Algorithms
  • [2] THE GRAND TOUR - A TOOL FOR VIEWING MULTIDIMENSIONAL DATA
    ASIMOV, D
    [J]. SIAM JOURNAL ON SCIENTIFIC AND STATISTICAL COMPUTING, 1985, 6 (01): : 128 - 143
  • [3] BEDDOW J, 1990, P 1 INT C VIS 90 SAN
  • [4] BERTIN J, 1981, GRAPHICS GRAPHIC INF
  • [5] Variation in gene expression patterns in human gastric cancers
    Chen, X
    Leung, SY
    Yuen, ST
    Chu, KM
    Ji, JF
    Li, R
    Chan, ASY
    Law, S
    Troyanskaya, OG
    Wong, J
    So, S
    Botstein, D
    Brown, PO
    [J]. MOLECULAR BIOLOGY OF THE CELL, 2003, 14 (08) : 3208 - 3215
  • [6] USE OF FACES TO REPRESENT POINTS IN K-DIMENSIONAL SPACE GRAPHICALLY
    CHERNOFF, H
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1973, 68 (342) : 361 - 368
  • [7] CHERNOFF H, 1971, J AM STAT ASSOC, V68, P361
  • [8] *COMP VIS PATT IM, 3D STAR COORD BAS WE
  • [9] de Ridder D, 2003, LECT NOTES COMPUT SC, V2714, P333
  • [10] *EUR BIOINF I, EXPR PROF