DNA as a molecular wire

被引:106
作者
Berlin, YA
Burin, AL
Ratner, MA
机构
[1] Northwestern Univ, Dept Chem, Ctr Nanofabricat & Mol Self Assembly, Evanston, IL 60208 USA
[2] Northwestern Univ, Mat Res Ctr, Evanston, IL 60208 USA
基金
美国国家科学基金会;
关键词
molecular wires; tunneling; charge transfer in DNA; configurational dynamics;
D O I
10.1006/spmi.2000.0915
中图分类号
O469 [凝聚态物理学];
学科分类号
070205 ;
摘要
Physical mechanisms that might assure the functioning of DNA as a molecular wire are considered on the basis of recent progress in understanding long-range charge transfer in this biologically important molecule. Our analysis shows that DNA behaves as an insulator at low bias, while beyond the threshold the current sharply increases. Such behaviour concurs with recent experimental observations and is explained by the decrease of the energy gap between the HOMO of guanine bases and the Fermi level of the contact with the voltage applied across the individual DNA molecule. We propose a model for the hole injection in DNA, which is based on the dynamic control of this process by internal motions of base pairs in the stack. The temperature dependence of the voltage gap obtained within this model is found to be in reasonable agreement with the available experimental data. For systems, where charge transfer is controlled by changes in the relative orientation of the donor and acceptor and where the equilibrium states are optimally overlapped, the model predicts the decrease of the tunneling transfer rate with temperature. We also demonstrate that depending on the structure of the stack, hole transport along DNA wires above the voltage threshold can proceed via two different mechanisms. In the case of duplex DNA oligomers with stacked adenine-thymine and guanine-cytosine pairs migration of injected holes can be viewed as a series of short-range hops between energetically appropriate guanine bases. By contrast, in double-stranded poly(guanine)poly(cytosine) the band-like motion of holes through bases dominates. (C) 2000 Academic Press.
引用
收藏
页码:241 / 252
页数:12
相关论文
共 94 条
  • [1] MOLECULAR COMPUTATION OF SOLUTIONS TO COMBINATORIAL PROBLEMS
    ADLEMAN, LM
    [J]. SCIENCE, 1994, 266 (5187) : 1021 - 1024
  • [2] CO BINDING TO HEME-PROTEINS - A MODEL FOR BARRIER HEIGHT DISTRIBUTIONS AND SLOW CONFORMATIONAL-CHANGES
    AGMON, N
    HOPFIELD, JJ
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1983, 79 (04) : 2042 - 2053
  • [3] DIFFUSIVE DYNAMICS ON POTENTIAL-ENERGY SURFACES - NONEQUILIBRIUM CO BINDING TO HEME-PROTEINS
    AGMON, N
    RABINOVICH, S
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1992, 97 (10) : 7270 - 7286
  • [4] Organization of 'nanocrystal molecules' using DNA
    Alivisatos, AP
    Johnsson, KP
    Peng, XG
    Wilson, TE
    Loweth, CJ
    Bruchez, MP
    Schultz, PG
    [J]. NATURE, 1996, 382 (6592) : 609 - 611
  • [5] Rates of DNA-mediated electron transfer between metallointercalators
    Arkin, MR
    Stemp, EDA
    Holmlin, RE
    Barton, JK
    Hormann, A
    Olson, EJC
    Barbara, PF
    [J]. SCIENCE, 1996, 273 (5274) : 475 - 480
  • [6] DNA: Insulator or wire?
    Beratan, DN
    Priyadarshy, S
    Risser, SM
    [J]. CHEMISTRY & BIOLOGY, 1997, 4 (01): : 3 - 8
  • [7] Hierarchically constrained dynamics of the configurational coordinate for rate processes in complex systems
    Berlin, YA
    Burin, AL
    [J]. CHEMICAL PHYSICS LETTERS, 1997, 267 (3-4) : 234 - 243
  • [8] NONEXPONENTIAL NON-ARRHENIUS RELAXATION IN THE COURSE OF CO REBINDING TO HEME-PROTEINS
    BERLIN, YA
    FISCHER, SF
    CHEKUNAEV, NI
    GOLDANSKII, VI
    [J]. CHEMICAL PHYSICS, 1995, 200 (03) : 369 - 385
  • [9] On the long-range charge transfer in DNA
    Berlin, YA
    Burin, AL
    Ratner, MA
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (03) : 443 - 445
  • [10] Irreversible random transition theory as applied to rate processes in condensed media: Transient effects of constrained configuration rearrangements in complex systems
    Berlin, YA
    [J]. CHEMICAL PHYSICS, 1996, 212 (01) : 29 - 39