Exploring Nature and Predicting Strength of Hydrogen Bonds: A Correlation Analysis Between Atoms-in-Molecules Descriptors, Binding Energies, and Energy Components of Symmetry-Adapted Perturbation Theory

被引:1020
作者
Emamian, Saeedreza [1 ]
Lu, Tian [2 ]
Kruse, Holger [3 ]
Emamian, Hamidreza [4 ]
机构
[1] Islamic Azad Univ, Shahrood Branch, Chem Dept, Shahrood, Iran
[2] Beijing Kein Res Ctr Nat Sci, Beijing 100022, Peoples R China
[3] Czech Acad Sci, Inst Biophys, Kralovopolska 135, Brno 61265, Czech Republic
[4] Islamic Azad Univ, Neyshabur Branch, Technol & Proc New Mat Res Ctr, Mat Sci & Met Dept, Neyshabur, Iran
关键词
hydrogen bond; binding energy; supermolecular approach; symmetry-adapted perturbation theory; correlation analysis; quantum theory of atoms-in-molecules; coupled cluster; GAUSSIAN-BASIS SETS; ELECTRON-DENSITY; WAVE-FUNCTION; QTAIM; LOCALIZATION; PERSPECTIVES; CHEMISTRY; HALOGEN; VALENCE; LIGAND;
D O I
10.1002/jcc.26068
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
This work studies the underlying nature of H-bonds (HBs) of different types and strengths and tries to predict binding energies (BEs) based on the properties derived from wave function analysis. A total of 42 HB complexes constructed from 28 neutral and 14 charged monomers were considered. This set was designed to sample a wide range of HB strengths to obtain a complete view about HBs. BEs were derived with the accurate coupled cluster singles and doubles with perturbative triples correction (CCSD(T))(T) method and the physical components of the BE were investigated by symmetry-adapted perturbation theory (SAPT). Quantum theory of atoms-in-molecules (QTAIM) descriptors and other HB indices were calculated based on high-quality density functional theory wave functions. We propose a new and rigorous classification of H-bonds (HBs) based on the SAPT decomposition. Neutral complexes are either classified as "very weak" HBs with a BE >= -2.5 kcal/mol that are mainly dominated by both dispersion and electrostatic interactions or as "weak-to-medium" HBs with a BE varying between -2.5 and -14.0 kcal/mol that are only dominated by electrostatic interactions. On the other hand, charged complexes are divided into "medium" HBs with a BE in the range of -11.0 to -15.0 kcal/mol, which are mainly dominated by electrostatic interactions, or into "strong" HBs whose BE is more negative than -15.0 kcal/mol, which are mainly dominated by electrostatic together with induction interactions. Among various explored correlations between BEs and wave function-based HB descriptors, a fairly satisfactory correlation was found for the electron density at the bond critical point (BCP; rho(BCP)) of HBs. The fitted equation for neutral complexes is BE/kcal/mol = - 223.08 x rho(BCP)/a. u. + 0.7423 with a mean absolute percentage error (MAPE) of 14.7%, while that for charged complexes is BE/kcal/mol = - 332.34 x rho(BCP)/a. u. - 1.0661 with a MAPE of 10.0%. In practice, these equations may be used for a quick estimation of HB BEs, for example, for intramolecular HBs or large HB networks in biomolecules. (c) 2019 Wiley Periodicals, Inc.
引用
收藏
页码:2868 / 2881
页数:14
相关论文
共 62 条
  • [1] Estimating the energy of intramolecular hydrogen bonds from 1H NMR and QTAIM calculations
    Afonin, Andrei V.
    Vashchenko, Alexander V.
    Sigalov, Mark V.
    [J]. ORGANIC & BIOMOLECULAR CHEMISTRY, 2016, 14 (47) : 11199 - 11211
  • [2] Non-conventional hydrogen bonds
    Alkorta, I
    Rozas, I
    Elguero, J
    [J]. CHEMICAL SOCIETY REVIEWS, 1998, 27 (02) : 163 - 170
  • [3] Definition of the hydrogen bond (IUPAC Recommendations 2011)
    Arunan, Elangannan
    Desiraju, Gautam R.
    Klein, Roger A.
    Sadlej, Joanna
    Scheiner, Steve
    Alkorta, Ibon
    Clary, David C.
    Crabtree, Robert H.
    Dannenberg, Joseph J.
    Hobza, Pavel
    Kjaergaard, Henrik G.
    Legon, Anthony C.
    Mennucci, Benedetta
    Nesbitt, David J.
    [J]. PURE AND APPLIED CHEMISTRY, 2011, 83 (08) : 1637 - 1641
  • [4] Bader R. F., 1990, ENCY COMPUTATIONAL C
  • [5] Electron Density Characteristics in Bond Critical Point (QTAIM) versus Interaction Energy Components (SAPT): The Case of Charge-Assisted Hydrogen Bonding
    Bankiewicz, Barbara
    Matczak, Piotr
    Palusiak, Marcin
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2012, 116 (01) : 452 - 459
  • [7] A SIMPLE MEASURE OF ELECTRON LOCALIZATION IN ATOMIC AND MOLECULAR-SYSTEMS
    BECKE, AD
    EDGECOMBE, KE
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1990, 92 (09) : 5397 - 5403
  • [8] Bernstein J., 1994, Structure Correlation, P431
  • [9] CALCULATION OF SMALL MOLECULAR INTERACTIONS BY DIFFERENCES OF SEPARATE TOTAL ENERGIES - SOME PROCEDURES WITH REDUCED ERRORS
    BOYS, SF
    BERNARDI, F
    [J]. MOLECULAR PHYSICS, 1970, 19 (04) : 553 - &
  • [10] Comparing Counterpoise-Corrected, Uncorrected, and Averaged Binding Energies for Benchmarking Noncovalent Interactions
    Burns, Lori A.
    Marshall, Michael S.
    Sherrill, C. David
    [J]. JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2014, 10 (01) : 49 - 57