Grid as a bioinformatic tool

被引：16
作者：
Jacq, N
Blanchet, C
Combet, C
Cornillot, E
Duret, L
Kurata, K
Nakamura, H
Silvestre, T
Breton, V
机构：
[1] Univ Clermont Ferrand, Lab Phys Corpusculaire, CNRS, UMR 6533,IN2P3, F-63177 Clermont Ferrand, France
[2] Univ Lyon 1, CNRS, IBCP, UMR 5086, F-69007 Lyon, France
[3] Univ Clermont Ferrand, Lab Biol Protistes, CNRS, UMR 6023, F-63177 Aubiere, France
[4] Univ Lyon 1, CNRS, UMR 5558, INRIA Rhone Alpes,Lab Biol & Biomet Evout, F-69622 Villeurbanne, France
[5] Univ Tokyo, Res Ctr Adv Sci & Technol, Meguro Ku, Tokyo 1538904, Japan
来源：
PARALLEL COMPUTING | 2004年 / 30卷 / 9-10期
关键词：
software and data integration in genomics; grid computing; databases update and distribution on grid;
D O I：
10.1016/j.parco.2004.07.013
中图分类号：
TP301 [理论、方法];
学科分类号：
081202 ;
摘要：
The grid is a promising tool to resolve the crucial issue of software and data integration in biology. In this paper, we have reported on our experience in the deployment of bioinformatic grid applications within the framework of the DataGrid project. These applications inquired the potential impact of grids for CPU demanding algorithms and bioinformatics web portals and for the update and distribution of biological databases. Grid computing tests showed how resources sharing improves the current practice of bioinformatics. Reached performance demonstrated the interest of the grid tool. (C) 2004 Elsevier B.V. All rights reserved.
引用
收藏
页码：1093 / 1107
页数：15
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