common bean;
germplasm;
collecting expedition;
private allele;
GENETIC DIVERSITY;
POPULATION-STRUCTURE;
ON-FARM;
CORE COLLECTION;
SSR MARKERS;
LANDRACES;
EUROPE;
MICROSATELLITES;
VARIABILITY;
RESOURCES;
D O I:
10.3390/su11195270
中图分类号:
X [环境科学、安全科学];
学科分类号:
08 ;
0830 ;
摘要:
A remarkable portion of crop genetic diversity is represented by landraces and obsolete cultivars, that have not yet been integrated into the collections of genetic resources in genebanks. Fortunately, they are still maintained by small farmers in rural areas. Their acquisition is an important goal for collecting expeditions, followed by the evaluation of their genetic background. Molecular markers are powerful tools to evaluate the effectiveness of acquisition of new genetic variants. This approach was used for common bean landraces, that were collected through expeditions in the Slovak and Ukrainian Carpathians. In this study, microsatellite markers, developed from expressed sequence tags, were used for genotyping the collected materials. The sub-population of collected landraces contained higher total and average number of different alleles in comparison to equally large sub-populations of already-maintained cultivars. The same was true for the Shannon's information index, observed heterozygosity, and expected heterozygosity. Both sub-populations showed the presence of private alleles: Average values of 0.500 and 0.833 private alleles per genotype were detected in landraces, and cultivars, respectively. Obtained results emphasized the importance of collecting expeditions to specific regions where landraces are cultivated, even at the present time. The effectiveness of the acquisition of new genetic variability can be determined by molecular tools, as confirmed by microsatellite markers in this study.
机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Abenavoli, M. R.
;
Leone, M.
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Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Leone, M.
;
Sunseri, F.
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Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Sunseri, F.
;
Bacchi, M.
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机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Bacchi, M.
;
Sorgona, A.
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Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
机构:
Tennessee State Univ, Dept Agr & Environm Sci, Nashville, TN 37209 USATennessee State Univ, Dept Agr & Environm Sci, Nashville, TN 37209 USA
Blair, Matthew W.
;
Lorigados, Sandra M.
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机构:
Inst Nacl Ciencias Agr La Habana, San Jose De Las Lajas 32700, Mayabeque, CubaTennessee State Univ, Dept Agr & Environm Sci, Nashville, TN 37209 USA
机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Abenavoli, M. R.
;
Leone, M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Leone, M.
;
Sunseri, F.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Sunseri, F.
;
Bacchi, M.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
Bacchi, M.
;
Sorgona, A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, ItalyUniv Mediterranea Reggio Calabria, Dipartimento Agr, I-89124 Reggio Di Calabria, Italy
机构:
Tennessee State Univ, Dept Agr & Environm Sci, Nashville, TN 37209 USATennessee State Univ, Dept Agr & Environm Sci, Nashville, TN 37209 USA
Blair, Matthew W.
;
Lorigados, Sandra M.
论文数: 0引用数: 0
h-index: 0
机构:
Inst Nacl Ciencias Agr La Habana, San Jose De Las Lajas 32700, Mayabeque, CubaTennessee State Univ, Dept Agr & Environm Sci, Nashville, TN 37209 USA