ARL3 Mutations Cause Joubert Syndrome by Disrupting Ciliary Protein Composition

被引:61
作者
Alkanderi, Sumaya [1 ]
Molinari, Elisa [1 ]
Shaheen, Ranad [2 ]
Elmaghloob, Yasmin [3 ]
Stephen, Louise A. [3 ]
Sammut, Veronica [1 ]
Ramsbottom, Simon A. [1 ]
Srivastava, Shalabh [1 ,4 ]
Cairns, George [1 ]
Edwards, Noel [1 ]
Rice, Sarah J. [1 ]
Ewida, Nour [2 ]
Alhashem, Amal [5 ,6 ]
White, Kathryn [7 ]
Miles, Colin G. [1 ]
Steel, David H. [1 ,8 ]
Alkuraya, Fowzan S. [2 ,6 ]
Ismail, Shehab [3 ,9 ]
Sayer, John A. [1 ,4 ]
机构
[1] Newcastle Univ, Int Ctr Life, Inst Genet Med, Cent Pkwy, Newcastle Upon Tyne NE1 3BZ, Tyne & Wear, England
[2] King Faisal Specialist Hosp & Res Ctr, Dept Genet, Riyadh 11211, Saudi Arabia
[3] Beatson Inst Canc Res, Struct Biol Cilia Lab, Switchback Rd, Glasgow G61 1BD, Lanark, Scotland
[4] Newcastle Hosp NHS Fdn Trust, Renal Serv, Newcastle Upon Tyne NE7 7DN, Tyne & Wear, England
[5] Prince Sultan Med Mil City, Dept Pediat, Riyadh 12233, Saudi Arabia
[6] Alfaisal Univ, Coll Med, Dept Anat & Cell Biol, Riyadh 11533, Saudi Arabia
[7] Newcastle Univ, Electron Microscopy Res Serv, Newcastle Upon Tyne NE2 4HH, Tyne & Wear, England
[8] Sunderland Eye Infirm, Queen Alexandra Rd, Sunderland SR2 9HP, Tyne & Wear, England
[9] Univ Glasgow, Inst Canc Sci, Glasgow G61 1QH, Lanark, Scotland
基金
英国医学研究理事会;
关键词
SMALL-MOLECULE INHIBITION; RETINITIS-PIGMENTOSA; CILIOPATHY PHENOTYPES; GENE; INPP5E; CARGO; NEPHRONOPHTHISIS; CILIOGENESIS; MECHANISMS; RELEASE;
D O I
10.1016/j.ajhg.2018.08.015
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Joubert syndrome (JBTS) is a genetically heterogeneous autosomal-recessive neurodevelopmental ciliopathy. We investigated further the underlying genetic etiology of Joubert syndrome by studying two unrelated families in whom JBTS was not associated with pathogenic variants in known JBTS-associated genes. Combined autozygosity mapping of both families highlighted a candidate locus on chromosome 10 (chr10: 101569997-109106128, UCSC Genome Browser hg 19), and exome sequencing revealed two missense variants in ARL3 within the candidate locus. The encoded protein, ADP ribosylation factor-like GTPase 3 (ARL3), is a small GTP-binding protein that is involved in directing lipid-modified proteins into the cilium in a GTP-dependent manner. Both missense variants replace the highly conserved Arg149 residue, which we show to be necessary for the interaction with its guanine nucleotide exchange factor ARL13B, such that the mutant protein is associated with reduced INPP5E and NPHP3 localization in cilia. We propose that ARL3 provides a potential hub in the network of proteins implicated in ciliopathies, whereby perturbation of ARL3 leads to the mislocalization of multiple ciliary proteins as a result of abnormal displacement of lipidated protein cargo.
引用
收藏
页码:612 / 620
页数:9
相关论文
共 44 条
[1]   Mutations in CSPP1 Lead to Classical Joubert Syndrome [J].
Akizu, Naiara ;
Silhavy, Jennifer L. ;
Rosti, Rasim Ozgur ;
Scott, Eric ;
Fenstermaker, Ali G. ;
Schroth, Jana ;
Zaki, Maha S. ;
Sanchez, Henry ;
Gupta, Neerja ;
Kabra, Madhulika ;
Kara, Majdi ;
Ben-Omran, Tawfeg ;
Rosti, Basak ;
Guemez-Gamboa, Alicia ;
Spencer, Emily ;
Pan, Roger ;
Cai, Na ;
Abdellateef, Mostafa ;
Gabriel, Stacey ;
Halbritter, Jan ;
Hildebrandt, Friedhelm ;
van Bokhoven, Hans ;
Gunel, Murat ;
Gleeson, Joseph G. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2014, 94 (01) :80-86
[2]   Loss of nephrocystin-3 function can cause embryonic lethality, meckel-gruber-like syndrome, situs inversus, and renal-hepatic-pancreatic dysplasia [J].
Bergmann, Carsten ;
Fliegauf, Manfred ;
Bruechle, Nadina Ortiz ;
Frank, Valeska ;
Olbrich, Heike ;
Kirschner, Jan ;
Schermer, Bernhard ;
Schmedding, Ingolf ;
Kispert, Andreas ;
Kraenzlin, Bettina ;
Nuernberg, Gudrun ;
Becker, Christian ;
Grimm, Tiemo ;
Girschick, Gundula ;
Lynch, Sally A. ;
Kelehan, Peter ;
Senderek, Jan ;
Neuhaus, Thomas J. ;
Stallmach, Thomas ;
Zentgraf, Hanswalter ;
Nuernberg, Peter ;
Gretz, Norbert ;
Lo, Cecilia ;
Lienkamp, Soeren ;
Schaefer, Tobias ;
Walz, Gerd ;
Benzing, Thomas ;
Zerres, Klaus ;
Omran, Heymut .
AMERICAN JOURNAL OF HUMAN GENETICS, 2008, 82 (04) :959-970
[3]   Mutations in INPP5E, encoding inositol polyphosphate-5-phosphatase E, link phosphatidyl inositol signaling to the ciliopathies [J].
Bielas, Stephanie L. ;
Silhavy, Jennifer L. ;
Brancati, Francesco ;
Kisseleva, Marina V. ;
Al-Gazali, Lihadh ;
Laszlo Sztriha ;
Bayoumi, Riad A. ;
Zaki, Maha S. ;
Abdel-Aleem, Alice ;
Rosti, Rasim Ozgur ;
Kayserili, Hulya ;
Swistun, Dominika ;
Scott, Lesley C. ;
Bertini, Enrico ;
Boltshauser, Eugen ;
Fazzi, Elisa ;
Travaglini, Lorena ;
Field, Seth J. ;
Gayral, Stephanie ;
Jacoby, Monique ;
Schurmans, Stephane ;
Dallapiccola, Bruno ;
Majerus, Philip W. ;
Valente, Enza Maria ;
Gleeson, Joseph G. .
NATURE GENETICS, 2009, 41 (09) :1032-U108
[4]   Mutations in the cilia gene ARL13B lead to the classical form of Joubert syndrome [J].
Cantagrel, Vincent ;
Silhavy, Jennifer L. ;
Bielas, Stephanie L. ;
Swistun, Dominika ;
Marsh, Sarah E. ;
Bertrand, Julien Y. ;
Audollent, Sophie ;
Attie-Bitach, Tania ;
Holden, Kenton R. ;
Dobyns, William B. ;
Traver, David ;
Al-Gazali, Lihadh ;
Ali, Bassam R. ;
Lindner, Tom H. ;
Caspary, Tamara ;
Otto, Edgar A. ;
Hildebrandt, Friedhelm ;
Glass, Ian A. ;
Logan, Clare V. ;
Johnson, Colin A. ;
Bennett, Christopher ;
Brancati, Francesco ;
Valente, Enza Maria ;
Woods, C. Geoffrey ;
Gleeson, Joseph G. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2008, 83 (02) :170-179
[5]   Exome Capture Reveals ZNF423 and CEP164 Mutations, Linking Renal Ciliopathies to DNA Damage Response Signaling [J].
Chaki, Moumita ;
Airik, Rannar ;
Ghosh, Amiya K. ;
Giles, Rachel H. ;
Chen, Rui ;
Slaats, Gisela G. ;
Wang, Hui ;
Hurd, Toby W. ;
Zhou, Weibin ;
Cluckey, Andrew ;
Gee, Heon Yung ;
Ramaswami, Gokul ;
Hong, Chen-Jei ;
Hamilton, Bruce A. ;
Cervenka, Igor ;
Ganji, Ranjani Sri ;
Bryja, Vitezslav ;
Arts, Heleen H. ;
van Reeuwijk, Jeroen ;
Oud, Machteld M. ;
Letteboer, Stef J. F. ;
Roepman, Ronald ;
Husson, Herve ;
Ibraghimov-Beskrovnaya, Oxana ;
Yasunaga, Takayuki ;
Walz, Gerd ;
Eley, Lorraine ;
Sayer, John A. ;
Schermer, Bernhard ;
Liebau, Max C. ;
Benzing, Thomas ;
Le Corre, Stephanie ;
Drummond, Iain ;
Janssen, Sabine ;
Allen, Susan J. ;
Natarajan, Sivakumar ;
O'Toole, John F. ;
Attanasio, Massimo ;
Saunier, Sophie ;
Antignac, Corinne ;
Koenekoop, Robert K. ;
Ren, Huanan ;
Lopez, Irma ;
Nayir, Ahmet ;
Stoetzel, Corinne ;
Dollfus, Helene ;
Massoudi, Rustin ;
Gleeson, Joseph G. ;
Andreoli, Sharon P. ;
Doherty, Dan G. .
CELL, 2012, 150 (03) :533-548
[6]  
Cuvillier A, 2000, J CELL SCI, V113, P2065
[7]   Mutations in the AHI1 gene, encoding Jouberin, cause Joubert syndrome with cortical polymicrogyria [J].
Dixon-Salazar, T ;
Silhavy, JL ;
Marsh, SE ;
Louie, CM ;
Scott, LC ;
Gururaj, A ;
Al-Gazali, L ;
Al-Tawari, AA ;
Kayserili, H ;
Sztriha, L ;
Gleeson, JG .
AMERICAN JOURNAL OF HUMAN GENETICS, 2004, 75 (06) :979-987
[8]   PDE6δ-mediated sorting of INPP5E into the cilium is determined by cargo-carrier affinity [J].
Fansa, Eyad Kalawy ;
Koesling, Stefanie Kristine ;
Zent, Eldar ;
Wittinghofer, Alfred ;
Ismail, Shehab .
NATURE COMMUNICATIONS, 2016, 7
[9]   Abnormal cerebellar development and axonal decussation due to mutations in AHI1 in Joubert syndrome [J].
Ferland, RJ ;
Eyaid, W ;
Collura, RV ;
Tully, LD ;
Hill, RS ;
Al-Nouri, D ;
Al-Rumayyan, A ;
Topcu, M ;
Gascon, G ;
Bodell, A ;
Shugart, YY ;
Ruvolo, M ;
Walsh, CA .
NATURE GENETICS, 2004, 36 (09) :1008-1013
[10]   Recessive and Dominant De Novo ITPR1 Mutations Cause Gillespie Syndrome [J].
Gerber, Sylvie ;
Alzayady, Kamil J. ;
Burglen, Lydie ;
Bremond-Gignac, Dominique ;
Marchesin, Valentina ;
Roche, Olivier ;
Rio, Marlene ;
Funalot, Benoit ;
Calmon, Raphael ;
Durr, Alexandra ;
Gil-da-Silva-Lopes, Vera Lucia ;
Ribeiro Bittar, Maria Fernanda ;
Orssaud, Christophe ;
Heron, Benedicte ;
Ayoub, Edward ;
Berquin, Patrick ;
Bahi-Buisson, Nadia ;
Bole, Christine ;
Masson, Cecile ;
Munnich, Arnold ;
Simons, Matias ;
Delous, Marion ;
Dollfus, Helene ;
Boddaert, Nathalie ;
Lyonnet, Stanislas ;
Kaplan, Josseline ;
Calvas, Patrick ;
Yule, David I. ;
Rozet, Jean-Michel ;
Taie, Lucas Fares .
AMERICAN JOURNAL OF HUMAN GENETICS, 2016, 98 (05) :971-980