Scaling Up Scientific Discovery in Sleep Medicine: The National Sleep Research Resource

被引:221
作者
Dean, Dennis A., II [1 ,2 ]
Goldberger, Ary L. [2 ,3 ,4 ]
Mueller, Remo [1 ,2 ]
Kim, Matthew [1 ,2 ]
Rueschman, Michael [1 ]
Mobley, Daniel [1 ]
Sahoo, Satya S. [5 ,6 ]
Jayapandian, Catherine P. [5 ,6 ]
Cui, Licong [5 ,6 ]
Morrical, Michael G. [1 ]
Surovec, Susan [1 ]
Zhang, Guo-Qiang [7 ]
Redline, Susan [1 ,2 ,3 ,8 ]
机构
[1] Brigham & Womens Hosp, 75 Francis St, Boston, MA 02115 USA
[2] Harvard Univ, Sch Med, Boston, MA USA
[3] Beth Israel Deaconess Med Ctr, Boston, MA 02215 USA
[4] Harvard Univ, WYSS Inst, Cambridge, MA 02138 USA
[5] Case Western Reserve Univ, Div Med Informat, Cleveland, OH 44106 USA
[6] Case Western Reserve Univ, Elect Engn Comp Sci Dept, Cleveland, OH 44106 USA
[7] Univ Kentucky, Inst Biomed Informat, Lexington, KY USA
[8] Harvard Univ, Sch Publ Hlth, 665 Huntington Ave, Boston, MA 02115 USA
关键词
electrocardiography; polysomnography; signal processing; spectral analysis; precision medicine; big data; BIG-DATA; OSTEOPOROTIC FRACTURES; OLDER MEN; PREVALENCE; HEART; CHALLENGES; DYNAMICS; DESIGN; HEALTH; ADENOTONSILLECTOMY;
D O I
10.5665/sleep.5774
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
Professional sleep societies have identified a need for strategic research in multiple areas that may benefit from access to and aggregation of large, multidimensional datasets. Technological advances provide opportunities to extract and analyze physiological signals and other biomedical information from datasets of unprecedented size, heterogeneity, and complexity. The National Institutes of Health has implemented a Big Data to Knowledge (BD2K) initiative that aims to develop and disseminate state of the art big data access tools and analytical methods. The National Sleep Research Resource (NSRR) is a new National Heart, Lung, and Blood Institute resource designed to provide big data resources to the sleep research community. The NSRR is a web-based data portal that aggregates, harmonizes, and organizes sleep and clinical data from thousands of individuals studied as part of cohort studies or clinical trials and provides the user a suite of tools to facilitate data exploration and data visualization. Each deidentified study record minimally includes the summary results of an overnight sleep study; annotation files with scored events; the raw physiological signals from the sleep record; and available clinical and physiological data. NSRR is designed to be interoperable with other public data resources such as the Biologic Specimen and Data Repository Information Coordinating Center Demographics (BioLINCC) data and analyzed with methods provided by the Research Resource for Complex Physiological Signals (PhysioNet). This article reviews the key objectives, challenges and operational solutions to addressing big data opportunities for sleep research in the context of the national sleep research agenda. It provides information to facilitate further interactions of the user community with NSRR, a community resource.
引用
收藏
页码:1151 / 1164
页数:14
相关论文
共 56 条
  • [1] [Anonymous], NAT I HLTH SLEEP DIS
  • [2] Sleep disturbances and their correlates in elderly Japanese American men residing in Hawaii
    Babar, SI
    Enright, PL
    Boyle, P
    Foley, D
    Sharp, DS
    Petrovitch, H
    Quan, SF
    [J]. JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES, 2000, 55 (07): : M406 - M411
  • [3] Multi-ethnic study of atherosclerosis: Objectives and design
    Bild, DE
    Bluemke, DA
    Burke, GL
    Detrano, R
    Roux, AVD
    Folsom, AR
    Greenland, P
    Jacobs, DR
    Kronmal, R
    Liu, K
    Nelson, JC
    O'Leary, D
    Saad, MF
    Shea, S
    Szklo, M
    Tracy, RP
    [J]. AMERICAN JOURNAL OF EPIDEMIOLOGY, 2002, 156 (09) : 871 - 881
  • [4] Trait-like individual differences in the human sleep electroencephalogram
    Buckelmüller, J
    Landolt, HP
    Stassen, HH
    Achermann, P
    [J]. NEUROSCIENCE, 2006, 138 (01) : 351 - 356
  • [5] Camm AJ, 1996, CIRCULATION, V93, P1043
  • [6] Claman DM, 2006, J CLIN SLEEP MED, V2, P438
  • [7] ClinicalTrials.gov, NULL PREGN OUTC STUD, Vhttp://clinicaltrials.gov/ct2/show/NCT01322529
  • [8] ClinicalTrials.gov, HEART BIOM EV APN TR
  • [9] ClinicalTrials.gov, SLEEP APN INT CARD D
  • [10] Multiscale entropy analysis of biological signals
    Costa, M
    Goldberger, AL
    Peng, CK
    [J]. PHYSICAL REVIEW E, 2005, 71 (02):