Curcumin specifically binds to the human calcium-calmodulin-dependent protein kinase IV: fluorescence and molecular dynamics simulation studies
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作者:
Hoda, Nasimul
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Jamia Millia Islamia, Dept Chem, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Hoda, Nasimul
[1
]
Naz, Huma
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Naz, Huma
[2
]
Jameel, Ehtesham
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机构:
Babasaheb Bhimrao Ambedkar Bihar Univ, Dept Chem, Muzaffarpur 842002, Bihar, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Jameel, Ehtesham
[3
]
Shandilya, Ashutosh
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机构:
Indian Inst Technol, Supercomp Facil Bioinformat & Computat Biol, New Delhi 110016, India
Indian Inst Technol, Dept Chem, New Delhi 110016, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Shandilya, Ashutosh
[4
,5
]
Dey, Sharmistha
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All India Inst Med Sci, Dept Biophys, New Delhi 110029, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Dey, Sharmistha
[6
]
Hassan, Md. Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Hassan, Md. Imtaiyaz
[2
]
Ahmad, Faizan
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Ahmad, Faizan
[2
]
Jayaram, B.
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Indian Inst Technol, Supercomp Facil Bioinformat & Computat Biol, New Delhi 110016, India
Indian Inst Technol, Dept Chem, New Delhi 110016, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Jayaram, B.
[4
,5
]
机构:
[1] Jamia Millia Islamia, Dept Chem, New Delhi 110025, India
[2] Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
high affinity ligand;
molecular dynamics simulation;
calcium-calmodulin-dependent protein kinase IV;
docking;
drug target;
curcumin;
CLINICAL-APPLICATIONS;
LIGAND COMPLEXES;
CANCER-THERAPY;
NUCLEAR;
CELLS;
IDENTIFICATION;
PROTOCOL;
DOCKING;
ACTIVATION;
EXPRESSION;
D O I:
10.1080/07391102.2015.1046934
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Calcium-calmodulin-dependent protein kinase IV (CAMK4) plays significant role in the regulation of calcium-dependent gene expression, and thus, it is involved in varieties of cellular functions such as cell signaling and neuronal survival. On the other hand, curcumin, a naturally occurring yellow bioactive component of turmeric possesses wide spectrum of biological actions, and it is widely used to treat atherosclerosis, diabetes, cancer, and inflammation. It also acts as an antioxidant. Here, we studied the interaction of curcumin with human CAMK4 at pH 7.4 using molecular docking, molecular dynamics (MD) simulations, fluorescence binding, and surface plasmon resonance (SPR) methods. We performed MD simulations for both neutral and anionic forms of CAMK4-curcumin complexes for a reasonably long time (150ns) to see the overall stability of the protein-ligand complex. Molecular docking studies revealed that the curcumin binds in the large hydrophobic cavity of kinase domain of CAMK4 through several hydrophobic and hydrogen-bonded interactions. Additionally, MD simulations studies contributed in understanding the stability of protein-ligand complex system in aqueous solution and conformational changes in the CAMK4 upon binding of curcumin. A significant increase in the fluorescence intensity at 495nm was observed (lambda(exc)=425nm), suggesting a strong interaction of curcumin to the CAMK4. A high binding affinity (K-D=3.7x10(-8)+/-.03M) of curcumin for the CAMK4 was measured by SPR further indicating curcumin as a potential ligand for the CAMK4. This study will provide insights into designing a new inspired curcumin derivatives as therapeutic agents against many life-threatening diseases.
机构:
Umm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi ArabiaUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Obaid, Rami J. J.
Shafie, Alaa
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机构:
Taif Univ, Coll Appl Med Sci, Dept Clin Lab Sci, POB 11099, Taif 21944, Saudi ArabiaUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Shafie, Alaa
Malik, M. Shaheer
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Umm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi ArabiaUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Malik, M. Shaheer
Al-Rooqi, Munirah M. M.
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机构:
Umm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi ArabiaUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Al-Rooqi, Munirah M. M.
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Moussa, Ziad
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Abdulaziz, Osama
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Aljuaid, Abdulelah
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Allahyani, Mamdouh
Almehmadi, Mazen
论文数: 0引用数: 0
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机构:
Taif Univ, Coll Appl Med Sci, Dept Clin Lab Sci, POB 11099, Taif 21944, Saudi ArabiaUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Almehmadi, Mazen
Anjum, Farah
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Taif Univ, Coll Appl Med Sci, Dept Clin Lab Sci, POB 11099, Taif 21944, Saudi ArabiaUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Anjum, Farah
Ahmed, Saleh A. A.
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Umm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
Assiut Univ, Fac Sci, Dept Chem, Assiut 71516, EgyptUmm Al Qura Univ, Fac Appl Sci, Dept Chem, Mecca 21955, Saudi Arabia
机构:
Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Hebei North Univ, Hebei Key Lab Neuropharmacol, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Liu, Sisi
Li, Yaxin
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Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Hebei North Univ, Hebei Key Lab Neuropharmacol, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Li, Yaxin
Wang, Jin
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Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Hebei North Univ, Hebei Key Lab Neuropharmacol, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Wang, Jin
Rui, Xue
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Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Rui, Xue
Tian, Haobo
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Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Tian, Haobo
Li, Chenshuo
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Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Li, Chenshuo
Guo, Chunyan
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Hebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
Hebei North Univ, Hebei Key Lab Neuropharmacol, Zhangjiakou 075000, Peoples R ChinaHebei North Univ, Dept Pharm, Zhangjiakou 075000, Peoples R China
机构:
Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R ChinaShanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R China
Liu, Zhaolong
Han, Gang
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Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R ChinaShanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R China
Han, Gang
Cao, Yu
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Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R ChinaShanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R China
Cao, Yu
Wang, Yidong
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Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R ChinaShanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R China
Wang, Yidong
Gong, Hangjun
论文数: 0引用数: 0
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Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R ChinaShanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Gen Surg, Shanghai 201203, Peoples R China
机构:
Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA
Koga, Tomohiro
Mizui, Masayuki
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA
Mizui, Masayuki
Yoshida, Nobuya
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA
Yoshida, Nobuya
Otomo, Kotaro
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA
Otomo, Kotaro
Lieberman, Linda A.
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Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA
Lieberman, Linda A.
Crispin, Jose C.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA
Crispin, Jose C.
Tsokos, George C.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USAHarvard Univ, Beth Israel Deaconess Med Ctr, Sch Med, Div Rheumatol,Dept Med, Boston, MA 02215 USA