Curcumin specifically binds to the human calcium-calmodulin-dependent protein kinase IV: fluorescence and molecular dynamics simulation studies
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作者:
Hoda, Nasimul
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Jamia Millia Islamia, Dept Chem, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Hoda, Nasimul
[1
]
Naz, Huma
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Naz, Huma
[2
]
Jameel, Ehtesham
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Babasaheb Bhimrao Ambedkar Bihar Univ, Dept Chem, Muzaffarpur 842002, Bihar, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Jameel, Ehtesham
[3
]
Shandilya, Ashutosh
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机构:
Indian Inst Technol, Supercomp Facil Bioinformat & Computat Biol, New Delhi 110016, India
Indian Inst Technol, Dept Chem, New Delhi 110016, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Shandilya, Ashutosh
[4
,5
]
Dey, Sharmistha
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All India Inst Med Sci, Dept Biophys, New Delhi 110029, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Dey, Sharmistha
[6
]
Hassan, Md. Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Hassan, Md. Imtaiyaz
[2
]
Ahmad, Faizan
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Ahmad, Faizan
[2
]
Jayaram, B.
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Indian Inst Technol, Supercomp Facil Bioinformat & Computat Biol, New Delhi 110016, India
Indian Inst Technol, Dept Chem, New Delhi 110016, IndiaJamia Millia Islamia, Dept Chem, New Delhi 110025, India
Jayaram, B.
[4
,5
]
机构:
[1] Jamia Millia Islamia, Dept Chem, New Delhi 110025, India
[2] Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
high affinity ligand;
molecular dynamics simulation;
calcium-calmodulin-dependent protein kinase IV;
docking;
drug target;
curcumin;
CLINICAL-APPLICATIONS;
LIGAND COMPLEXES;
CANCER-THERAPY;
NUCLEAR;
CELLS;
IDENTIFICATION;
PROTOCOL;
DOCKING;
ACTIVATION;
EXPRESSION;
D O I:
10.1080/07391102.2015.1046934
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Calcium-calmodulin-dependent protein kinase IV (CAMK4) plays significant role in the regulation of calcium-dependent gene expression, and thus, it is involved in varieties of cellular functions such as cell signaling and neuronal survival. On the other hand, curcumin, a naturally occurring yellow bioactive component of turmeric possesses wide spectrum of biological actions, and it is widely used to treat atherosclerosis, diabetes, cancer, and inflammation. It also acts as an antioxidant. Here, we studied the interaction of curcumin with human CAMK4 at pH 7.4 using molecular docking, molecular dynamics (MD) simulations, fluorescence binding, and surface plasmon resonance (SPR) methods. We performed MD simulations for both neutral and anionic forms of CAMK4-curcumin complexes for a reasonably long time (150ns) to see the overall stability of the protein-ligand complex. Molecular docking studies revealed that the curcumin binds in the large hydrophobic cavity of kinase domain of CAMK4 through several hydrophobic and hydrogen-bonded interactions. Additionally, MD simulations studies contributed in understanding the stability of protein-ligand complex system in aqueous solution and conformational changes in the CAMK4 upon binding of curcumin. A significant increase in the fluorescence intensity at 495nm was observed (lambda(exc)=425nm), suggesting a strong interaction of curcumin to the CAMK4. A high binding affinity (K-D=3.7x10(-8)+/-.03M) of curcumin for the CAMK4 was measured by SPR further indicating curcumin as a potential ligand for the CAMK4. This study will provide insights into designing a new inspired curcumin derivatives as therapeutic agents against many life-threatening diseases.
机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Naz, Huma
Shahbaaz, Mohd.
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Durban Univ Technol, Dept Chem, ZA-4000 Durban, South AfricaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Shahbaaz, Mohd.
Bisetty, Krishna
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Durban Univ Technol, Dept Chem, ZA-4000 Durban, South AfricaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Bisetty, Krishna
Islam, Asimul
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机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Islam, Asimul
Ahmad, Faizan
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机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Ahmad, Faizan
Hassan, Md. Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Naz, Huma
Shahbaaz, Mohd.
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Durban Univ Technol, Dept Chem, ZA-4000 Durban, South AfricaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Shahbaaz, Mohd.
Haque, Md. Anzarul
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Haque, Md. Anzarul
Bisetty, Krishna
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Durban Univ Technol, Dept Chem, ZA-4000 Durban, South AfricaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Bisetty, Krishna
Islam, Asimul
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h-index: 0
机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Islam, Asimul
Ahmad, Faizan
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机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Ahmad, Faizan
Hassan, Md. Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
Beg, Anam
Khan, Faez Iqbal
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Rhodes Univ, Computat Mechanist Chem & Drug Discovery, Grahamstown, South AfricaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
Khan, Faez Iqbal
Lobb, Kevin A.
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Rhodes Univ, Computat Mechanist Chem & Drug Discovery, Grahamstown, South AfricaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
Lobb, Kevin A.
Islam, Asimul
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
Islam, Asimul
Ahmad, Faizan
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
Ahmad, Faizan
Hassan, Md. Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Naz, Huma
Khan, Parvez
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Khan, Parvez
Tarique, Mohd.
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All India Inst Med Sci, Dept Biochem, New Delhi 110029, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Tarique, Mohd.
Rahman, Safikur
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Yeungnam Univ, Dept Med Biotechnol, Gyongsan 712749, South KoreaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Rahman, Safikur
Meena, Abha
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Cent Inst Med & Aromat Plants, CSIR, Lucknow 226015, Uttar Pradesh, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Meena, Abha
Ahamad, Shahzaib
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IFTM Univ, Coll Engn & Technol, Dept Biotechnol, Delhi Rd, Lodhipur Rajput, Moradabad, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Ahamad, Shahzaib
Luqman, Suaib
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机构:
Cent Inst Med & Aromat Plants, CSIR, Lucknow 226015, Uttar Pradesh, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Luqman, Suaib
Islam, Asimul
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Islam, Asimul
Ahmad, Faizan
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机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Ahmad, Faizan
Hassan, Md. Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Naz, Huma
Jameel, Ehtesham
论文数: 0引用数: 0
h-index: 0
机构:
BR Ambedkar Bihar Univ, Dept Chem, Muzaffarpur 842001, Bihar, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Jameel, Ehtesham
Hoda, Nasimul
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h-index: 0
机构:
Jamia Millia Islamia, Dept Chem, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Hoda, Nasimul
Shandilya, Ashutosh
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机构:
Indian Inst Technol, Supercomp Facil Bioinformat & Computat Biol, Hauz Khas, New Delhi 110016, India
Indian Inst Technol, Dept Chem, Hauz Khas, New Delhi 110016, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Shandilya, Ashutosh
Khan, Parvez
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Khan, Parvez
Islam, Asimul
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机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Islam, Asimul
Ahmad, Faizan
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机构:
Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Ahmad, Faizan
Jayaram, B.
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h-index: 0
机构:
Indian Inst Technol, Supercomp Facil Bioinformat & Computat Biol, Hauz Khas, New Delhi 110016, India
Indian Inst Technol, Dept Chem, Hauz Khas, New Delhi 110016, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Jayaram, B.
Hassan, Md Imtaiyaz
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
机构:
Univ Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Univ Tehran Med Sci, Sch Adv Technol Med, Dept Neurosci, Tehran, IranUniv Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Sadat-Shirazi, Mitra-Sadat
Ahmadian-Moghadam, Hamid
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Univ Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, IranUniv Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Ahmadian-Moghadam, Hamid
Khalifeh, Solmaz
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Islamic Azad Univ, Tehran Med Sci, CNRC, Tehran, IranUniv Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Khalifeh, Solmaz
Zadeh-Tehrani, Setareh Nouri
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Univ Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, IranUniv Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Zadeh-Tehrani, Setareh Nouri
Farahmandfar, Maryam
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h-index: 0
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Univ Tehran Med Sci, Sch Adv Technol Med, Dept Neurosci, Tehran, IranUniv Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Farahmandfar, Maryam
Zarrindast, Mohammad-Reza
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Univ Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran
Univ Tehran Med Sci, Sch Med, Dept Pharmacol, Tehran, Iran
Univ Tehran Med Sci, Endocrinol & Metab Res Inst, Tehran, IranUniv Tehran Med Sci, Iranian Natl Ctr Addict Studies, POB 13145-784, Tehran, Iran