Plant Growth Promotion Driven by a Novel Caulobacter Strain

被引:40
作者
Luo, Dexian [1 ,2 ]
Langendries, Sarah [1 ,2 ]
Mendez, Sonia Garcia [1 ,2 ,3 ]
De Ryck, Joren [1 ,2 ]
Liu, Derui [1 ,2 ]
Beirinckx, Stien [1 ,2 ,4 ]
Willems, Anne [3 ]
Russinova, Eugenia [1 ,2 ]
Debode, Jane [4 ]
Goormachtig, Sofie [1 ,2 ]
机构
[1] Univ Ghent, Dept Plant Biotechnol & Bioinformat, B-9052 Ghent, Belgium
[2] VIB, Ctr Plant Syst Biol, B-9052 Ghent, Belgium
[3] Univ Ghent, Fac Sci, Dept Biochem & Microbiol, B-9000 Ghent, Belgium
[4] Flanders Res Inst Agr Fisheries & Food ILVO, Plant Sci Unit, B-9820 Merelbeke, Belgium
关键词
genetics and gene regulation; genomics; microscopy and imaging; molecular signaling; rhizosphere and phyllosphere ecology; INDUCED SYSTEMIC RESISTANCE; ARABIDOPSIS-THALIANA; LEAF DEVELOPMENT; AUXIN TRANSPORT; NITRIC-OXIDE; SP NOV; RHIZOBACTERIA; BACTERIA; RHIZOSPHERE; EXPRESSION;
D O I
10.1094/MPMI-12-18-0347-R
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Soil microbial communities hold great potential for sustainable and ecologically compatible agriculture. Although numerous plant-beneficial bacterial strains from a wide range of taxonomic groups have been reported, very little evidence is available on the plant-beneficial role of bacteria from the genus Caulobacter. Here, the mode of action of a Caulobacter strain, designated RHG1, which had originally been identified through a microbial screen for plant growth-promoting (PGP) bacteria in maize (Zea mays), is investigated in Arabidopsis thaliana. RHG1 colonized both roots and shoots of Arabidopsis, promoted lateral root formation in the root, and increased leaf number and leaf size in the shoot. The genome of RHG1 was sequenced and was utilized to look for PGP factors. Our data revealed that the bacterial production of nitric oxide, auxins, cytokinins, or 1-aminocyclopropane-l-carboxylate deaminase as PGP factors could be excluded. However, the analysis of brassinosteroid mutants suggests that an unknown PGP mechanism is involved that impinges directly or indirectly on the pathway of this growth hormone.
引用
收藏
页码:1162 / 1174
页数:13
相关论文
共 68 条
[1]   Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation [J].
Agler, Matthew T. ;
Ruhe, Jonas ;
Kroll, Samuel ;
Morhenn, Constanze ;
Kim, Sang-Tae ;
Weigel, Detlef ;
Kemen, Eric M. .
PLOS BIOLOGY, 2016, 14 (01)
[2]   Exit from Proliferation during Leaf Development in Arabidopsis thaliana: A Not-So-Gradual Process [J].
Andriankaja, Megan ;
Dhondt, Stijn ;
De Bodt, Stefanie ;
Vanhaeren, Hannes ;
Coppens, Frederik ;
De Milde, Liesbeth ;
Muehlenbock, Per ;
Skirycz, Aleksandra ;
Gonzalez, Nathalie ;
Beemster, Gerrit T. S. ;
Inze, Dirk .
DEVELOPMENTAL CELL, 2012, 22 (01) :64-78
[3]   bcgTree: automatized phylogenetic tree building from bacterial core genomes [J].
Ankenbrand, Markus J. ;
Keller, Alexander .
GENOME, 2016, 59 (10) :783-791
[4]   Functional overlap of the Arabidopsis leaf and root microbiota [J].
Bai, Yang ;
Mueller, Daniel B. ;
Srinivas, Girish ;
Garrido-Oter, Ruben ;
Potthoff, Eva ;
Rott, Matthias ;
Dombrowski, Nina ;
Muench, Philipp C. ;
Spaepen, Stijn ;
Remus-Emsermann, Mitja ;
Huettel, Bruno ;
McHardy, Alice C. ;
Vorholt, Julia A. ;
Schulze-Lefert, Paul .
NATURE, 2015, 528 (7582) :364-+
[5]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[6]   Local, efflux-dependent auxin gradients as a common module for plant organ formation [J].
Benková, E ;
Michniewicz, M ;
Sauer, M ;
Teichmann, T ;
Seifertová, D ;
Jürgens, G ;
Friml, J .
CELL, 2003, 115 (05) :591-602
[7]   Disease-induced assemblage of a plant-beneficial bacterial consortium [J].
Berendsen, Roeland L. ;
Vismans, Gilles ;
Yu, Ke ;
Song, Yang ;
de Jonge, Ronnie ;
Burgman, Wilco P. ;
Burmolle, Mette ;
Herschend, Jakob ;
Bakker, Peter A. H. M. ;
Pieterse, Corne M. J. .
ISME JOURNAL, 2018, 12 (06) :1496-1507
[8]   Unearthing the genomes of plant-beneficial Pseudomonas model strains WCS358, WCS374 and WCS417 [J].
Berendsen, Roeland L. ;
van Verk, Marcel C. ;
Stringlis, Ioannis A. ;
Zamioudis, Christos ;
Tommassen, Jan ;
Pieterse, Corne M. J. ;
Bakker, Peter A. H. M. .
BMC GENOMICS, 2015, 16
[9]   Volatile Indole Produced by Rhizobacterium Proteus vulgaris JBLS202 Stimulates Growth of Arabidopsis thaliana Through Auxin, Cytokinin, and Brassinosteroid Pathways [J].
Bhattacharyya, Dipto ;
Garladinne, Mallikarjuna ;
Lee, Yong Hoon .
JOURNAL OF PLANT GROWTH REGULATION, 2015, 34 (01) :158-168
[10]   BLAST plus : architecture and applications [J].
Camacho, Christiam ;
Coulouris, George ;
Avagyan, Vahram ;
Ma, Ning ;
Papadopoulos, Jason ;
Bealer, Kevin ;
Madden, Thomas L. .
BMC BIOINFORMATICS, 2009, 10