Hydrogen attachment dissociation of peptides containing disulfide bonds

A combination of tandem mass spectrometry (MS/MS) and hydrogen attachment dissociation (HAD) is a useful method for peptide sequence analysis. In this study, gas-phase fragmentation induced by the attachment of hydrogen to peptides containing disulfide bonds was investigated. Hydrogen attachment induced the cleavage of either the disulfide or N-C-alpha bond, which competitively occurred during HAD. The disulfide bond cleavage proceeded through an intermediate, which contains a thiyl radical (-S) and a thiol group (-SH). In contrast, N-C-alpha bond cleavage produced an intermediate containing an enol-imine group and alpha-carbon radical. The intermediate alpha-carbon radical then attacked the disulfide bond, resulting in a cyclic [z](+) fragment. The counterpart, [c + H](+) with a thiyl radical underwent further hydrogen attachment, producing [c + 2H](+). Because both disulfide and N-C-alpha bonds were cleaved by a single hydrogen attachment event, HAD-MS/MS can provide sequence information for the backbone region in the disulfide loop.