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The use of inferred haplotypes in downstream analyses
被引:33
作者
:
Lin, D. Y.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Lin, D. Y.
[
1
]
Huang, B. E.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Huang, B. E.
[
1
]
机构
:
[1]
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
来源
:
AMERICAN JOURNAL OF HUMAN GENETICS
|
2007年
/ 80卷
/ 03期
关键词
:
D O I
:
10.1086/512201
中图分类号
:
Q3 [遗传学];
学科分类号
:
071007 ;
090102 ;
摘要
:
引用
收藏
页码:577 / 579
页数:3
相关论文
共 12 条
[1]
Estimation and testing of genotype and haplotype effects in case-control studies: Comparison of weighted regression and multiple imputation procedures
[J].
Cordell, HJ
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge, Dept Med Genet, Cambridge Inst Med Res, Addenbrookes Hosp, Cambridge CB2 2XY, England
Univ Cambridge, Dept Med Genet, Cambridge Inst Med Res, Addenbrookes Hosp, Cambridge CB2 2XY, England
Cordell, HJ
.
GENETIC EPIDEMIOLOGY,
2006,
30
(03)
:259
-275
[2]
DEMPSTER AP, 1983, INCOMPLETE DATA SAMP, V2, P3
[3]
Inference on haplotype effects in case-control studies using unphased genotype data
[J].
Epstein, MP
论文数:
0
引用数:
0
h-index:
0
机构:
Emory Univ, Sch Med, Dept Human Genet, Atlanta, GA 30322 USA
Epstein, MP
;
Satten, GA
论文数:
0
引用数:
0
h-index:
0
机构:
Emory Univ, Sch Med, Dept Human Genet, Atlanta, GA 30322 USA
Satten, GA
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2003,
73
(06)
:1316
-1329
[4]
Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data
[J].
Fallin, D
论文数:
0
引用数:
0
h-index:
0
机构:
Case Western Reserve Univ, Dept Epidemiol & Biostat, Cleveland, OH 44109 USA
Fallin, D
;
Schork, NJ
论文数:
0
引用数:
0
h-index:
0
机构:
Case Western Reserve Univ, Dept Epidemiol & Biostat, Cleveland, OH 44109 USA
Schork, NJ
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2000,
67
(04)
:947
-959
[5]
Simple estimates of haplotype relative risks in case-control data
[J].
French, Benjamin
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
French, Benjamin
;
Lumley, Thomas
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Lumley, Thomas
;
Monks, Stephanie A.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Monks, Stephanie A.
;
Rice, Kenneth M.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Rice, Kenneth M.
;
Hindorff, Lucia A.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Hindorff, Lucia A.
;
Reiner, Alexander P.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Reiner, Alexander P.
;
Psaty, Bruce M.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Psaty, Bruce M.
.
GENETIC EPIDEMIOLOGY,
2006,
30
(06)
:485
-494
[6]
Accounting for haplotype uncertainty in matched association studies: A comparison of simple and flexible techniques
[J].
Kraft, P
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Kraft, P
;
Cox, DG
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Cox, DG
;
Paynter, RA
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Paynter, RA
;
Hunter, D
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Hunter, D
;
De Vivo, I
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
De Vivo, I
.
GENETIC EPIDEMIOLOGY,
2005,
28
(03)
:261
-272
[7]
Maximum likelihood estimation of haplotype effects and haplotype-environment interactions in association studies
[J].
Lin, DY
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Lin, DY
;
Zeng, D
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Zeng, D
;
Millikan, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Millikan, R
.
GENETIC EPIDEMIOLOGY,
2005,
29
(04)
:299
-312
[8]
Likelihood-based inference on haplotype effects in genetic association studies
[J].
Lin, DY
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Lin, DY
;
Zeng, D
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Zeng, D
.
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION,
2006,
101
(473)
:89
-104
[9]
A comparison of phasing algorithms for trios and unrelated individuals
[J].
Marchini, J
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Marchini, J
;
论文数:
引用数:
h-index:
机构:
Cutler, D
;
论文数:
引用数:
h-index:
机构:
Patterson, N
;
Stephens, M
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Stephens, M
;
Eskin, E
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0
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0
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0
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Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Eskin, E
;
Halperin, E
论文数:
0
引用数:
0
h-index:
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机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Halperin, E
;
Lin, S
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Lin, S
;
Qin, ZS
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Qin, ZS
;
Munro, HM
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Munro, HM
;
Abecasis, GR
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Abecasis, GR
;
Donnelly, P
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Donnelly, P
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2006,
78
(03)
:437
-450
[10]
Little loss of information due to unknown phase for fine-scale linkage-disequilibrium mapping with single-nucleotide-polymorphism genotype data
[J].
Morris, AP
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Morris, AP
;
Whittaker, JC
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Whittaker, JC
;
Balding, DJ
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Balding, DJ
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2004,
74
(05)
:945
-953
←
1
2
→
共 12 条
[1]
Estimation and testing of genotype and haplotype effects in case-control studies: Comparison of weighted regression and multiple imputation procedures
[J].
Cordell, HJ
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Cambridge, Dept Med Genet, Cambridge Inst Med Res, Addenbrookes Hosp, Cambridge CB2 2XY, England
Univ Cambridge, Dept Med Genet, Cambridge Inst Med Res, Addenbrookes Hosp, Cambridge CB2 2XY, England
Cordell, HJ
.
GENETIC EPIDEMIOLOGY,
2006,
30
(03)
:259
-275
[2]
DEMPSTER AP, 1983, INCOMPLETE DATA SAMP, V2, P3
[3]
Inference on haplotype effects in case-control studies using unphased genotype data
[J].
Epstein, MP
论文数:
0
引用数:
0
h-index:
0
机构:
Emory Univ, Sch Med, Dept Human Genet, Atlanta, GA 30322 USA
Epstein, MP
;
Satten, GA
论文数:
0
引用数:
0
h-index:
0
机构:
Emory Univ, Sch Med, Dept Human Genet, Atlanta, GA 30322 USA
Satten, GA
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2003,
73
(06)
:1316
-1329
[4]
Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data
[J].
Fallin, D
论文数:
0
引用数:
0
h-index:
0
机构:
Case Western Reserve Univ, Dept Epidemiol & Biostat, Cleveland, OH 44109 USA
Fallin, D
;
Schork, NJ
论文数:
0
引用数:
0
h-index:
0
机构:
Case Western Reserve Univ, Dept Epidemiol & Biostat, Cleveland, OH 44109 USA
Schork, NJ
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2000,
67
(04)
:947
-959
[5]
Simple estimates of haplotype relative risks in case-control data
[J].
French, Benjamin
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
French, Benjamin
;
Lumley, Thomas
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Lumley, Thomas
;
Monks, Stephanie A.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Monks, Stephanie A.
;
Rice, Kenneth M.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Rice, Kenneth M.
;
Hindorff, Lucia A.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Hindorff, Lucia A.
;
Reiner, Alexander P.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Reiner, Alexander P.
;
Psaty, Bruce M.
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Washington, Dept Biostat, Seattle, WA 98195 USA
Psaty, Bruce M.
.
GENETIC EPIDEMIOLOGY,
2006,
30
(06)
:485
-494
[6]
Accounting for haplotype uncertainty in matched association studies: A comparison of simple and flexible techniques
[J].
Kraft, P
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Kraft, P
;
Cox, DG
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Cox, DG
;
Paynter, RA
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Paynter, RA
;
Hunter, D
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
Hunter, D
;
De Vivo, I
论文数:
0
引用数:
0
h-index:
0
机构:
Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
De Vivo, I
.
GENETIC EPIDEMIOLOGY,
2005,
28
(03)
:261
-272
[7]
Maximum likelihood estimation of haplotype effects and haplotype-environment interactions in association studies
[J].
Lin, DY
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Lin, DY
;
Zeng, D
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Zeng, D
;
Millikan, R
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Millikan, R
.
GENETIC EPIDEMIOLOGY,
2005,
29
(04)
:299
-312
[8]
Likelihood-based inference on haplotype effects in genetic association studies
[J].
Lin, DY
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Lin, DY
;
Zeng, D
论文数:
0
引用数:
0
h-index:
0
机构:
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
Zeng, D
.
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION,
2006,
101
(473)
:89
-104
[9]
A comparison of phasing algorithms for trios and unrelated individuals
[J].
Marchini, J
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Marchini, J
;
论文数:
引用数:
h-index:
机构:
Cutler, D
;
论文数:
引用数:
h-index:
机构:
Patterson, N
;
Stephens, M
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Stephens, M
;
Eskin, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Eskin, E
;
Halperin, E
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Halperin, E
;
Lin, S
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Lin, S
;
Qin, ZS
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Qin, ZS
;
Munro, HM
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Munro, HM
;
Abecasis, GR
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Abecasis, GR
;
Donnelly, P
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Donnelly, P
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2006,
78
(03)
:437
-450
[10]
Little loss of information due to unknown phase for fine-scale linkage-disequilibrium mapping with single-nucleotide-polymorphism genotype data
[J].
Morris, AP
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Morris, AP
;
Whittaker, JC
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Whittaker, JC
;
Balding, DJ
论文数:
0
引用数:
0
h-index:
0
机构:
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Balding, DJ
.
AMERICAN JOURNAL OF HUMAN GENETICS,
2004,
74
(05)
:945
-953
←
1
2
→