The complete chloroplast genome of Quercus fenchengensis and the phylogenetic implication

被引:3
作者
Hu, Hua-Lei [1 ]
Wang, Lian-Zhen [2 ]
Yang, Jian [1 ]
Zhang, Ru-Song [1 ]
Li, Qun [1 ]
Liu, Yan-Qun [1 ]
Qin, Li [1 ]
机构
[1] Shenyang Agr Univ, Coll Biosci & Biotechnol, Dept Sericulture, 120 Dongling Rd, Shenyang 110866, Liaoning, Peoples R China
[2] Sericultural Inst Liaoning Prov, Res Grp Oaks, Fengcheng, Liaoning, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
基金
中国国家自然科学基金;
关键词
Quercus fenchengensis; chloroplast genome; phylogenetic relationship;
D O I
10.1080/23802359.2019.1666040
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Quercus fenchengsis is a rare Chinese oak species sporadically recorded in Fengcheng, Liaoning, Yuntai Mountain, Henan, and Qinling Mountains, Shaanxi. Here, the complete chloroplast (cp) genome of Q. fenchengensis was first reported. The cp genome is 161,296 bp in length with a GC content of 36.81%, and encodes 134 genes (86 protein-coding genes, 40 tRNA genes and eight rRNA genes). The phylogenetic tree based on the cp genome confirmed that Q. fenchengensis has a close relationship with Quercus aliena acutiserrata and Quercus dentata, consistent with the previous morphology-based suggestion that it would be a hybrid of Q. aliena acutiserrata and Q. dentata.
引用
收藏
页码:3066 / 3067
页数:2
相关论文
共 6 条
  • [1] MRBAYES: Bayesian inference of phylogenetic trees
    Huelsenbeck, JP
    Ronquist, F
    [J]. BIOINFORMATICS, 2001, 17 (08) : 754 - 755
  • [2] Jen HW, 1984, B BOT RES, V4, P195
  • [3] Wu Z. Y., 1999, Flora of China, P370
  • [4] Automatic annotation of organellar genomes with DOGMA
    Wyman, SK
    Jansen, RK
    Boore, JL
    [J]. BIOINFORMATICS, 2004, 20 (17) : 3252 - 3255
  • [5] Xu YC, 1998, FLORA CHINA, V22, P213
  • [6] Comparative Analysis of the Complete Chloroplast Genomes of Five Quercus Species
    Yang, Yanci
    Zhou, Tao
    Duan, Dong
    Yang, Jia
    Feng, Li
    Zhao, Guifang
    [J]. FRONTIERS IN PLANT SCIENCE, 2016, 7