Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum L.)

被引:51
作者
Yao, Yingyin [2 ,3 ,4 ]
Ni, Zhongfu [2 ,3 ,4 ]
Peng, Huiru [2 ,3 ,4 ]
Sun, Fenglong [2 ,3 ,4 ]
Xin, Mingming [2 ,3 ,4 ]
Sunkar, Ramanjulu [5 ]
Zhu, Jian-Kang [6 ]
Sun, Qixin [1 ,2 ,3 ,4 ]
机构
[1] China Agr Univ, Dept Plant Genet & Breeding, Beijing 100193, Peoples R China
[2] China Agr Univ, Key Lab Crop Heterosis & Utilizat MOE, Beijing Key Lab Crop Genet Improvement, Key Lab Crop Genom & Genet Improvement MOA, Beijing 100094, Peoples R China
[3] China Agr Univ, State Key Lab Agrobiotechnol, Beijing Key Lab Crop Genet Improvement, Key Lab Crop Genom & Genet Improvement MOA, Beijing 100094, Peoples R China
[4] Natl Plant Gene Res Ctr Beijing, Beijing 100094, Peoples R China
[5] Oklahoma State Univ, Dept Biochem & Mol Biol, Stillwater, OK 74078 USA
[6] Univ Calif Riverside, Dept Bot & Plant Sci, Riverside, CA 92521 USA
关键词
Small RNA; nat-siRNA; Expressed sequence tag; Wheat; Abiotic stress; MICRORNAS;
D O I
10.1007/s10142-010-0163-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Plant small RNAs are emerging as significant components of epigenetic processes and of gene networks involved in development and homeostasis. In this paper, to identify small RNAs in wheat, 2,076 small RNAs were identified in a small RNA library from leaf, root, and spike. These small RNAs mapped to non-coding regions the CDS region of protein-coding genes and 5' UTR and 3' UTR regions. The expression of small RNAs in seedling leaves, roots, and spikes were analyzed by northern blot, which indicates that some small RNAs were responsive to abiotic stress treatments including heat, cold, salt and dehydration.
引用
收藏
页码:187 / 190
页数:4
相关论文
共 50 条
[41]   An Overview of Small Non-coding RNAs [J].
Spurna, Klara ;
Viktorova, Jitka ;
Ruml, Tomas .
CHEMICKE LISTY, 2018, 112 (12) :811-818
[42]   Non-coding small RNAs and spermatogenesis [J].
Romero, Yannick ;
Calvel, Pierre ;
Nef, Serge .
M S-MEDECINE SCIENCES, 2012, 28 (05) :490-496
[43]   Small secreted peptides encoded on the wheat (triticum aestivum L.) genome and their potential roles in stress responses [J].
Tian, Dongdong ;
Xie, Qi ;
Deng, Zhichao ;
Xue, Jin ;
Li, Wei ;
Zhang, Zenglin ;
Dai, Yifei ;
Zheng, Bo ;
Lu, Tiegang ;
De Smet, Ive ;
Guo, Yongfeng .
FRONTIERS IN PLANT SCIENCE, 2022, 13
[44]   Computational identification of microRNAs and their targets in wheat (Triticum aestivum L.) [J].
HAN YouSheng ;
LUAN FuLei ;
ZHU HongLiang ;
SHAO Yi ;
CHEN AnJun ;
LU ChengWen ;
LUO YunBo & ZHU BenZhong Laboratory of Fruit Biotechnology ;
College of Food Science and Nutritional Engineering ;
China Agricultural University ;
Beijing 100083 ;
China .
Science in China(Series C:Life Sciences) , 2009, (11) :1091-1100
[45]   Genetic Mechanisms of Cold Signaling in Wheat (Triticum aestivum L.) [J].
Liu, Qiangbo ;
Zhang, Xiang ;
Su, Ying Hua ;
Zhang, Xian Sheng .
LIFE-BASEL, 2022, 12 (05)
[46]   Computational identification of microRNAs and their targets in wheat (Triticum aestivum L.) [J].
YouSheng Han ;
FuLei Luan ;
HongLiang Zhu ;
Yi Shao ;
AnJun Chen ;
ChengWen Lu ;
YunBo Luo ;
BenZhong Zhu .
Science in China Series C: Life Sciences, 2009, 52 :1091-1100
[47]   Consequences and Mitigation Strategies of Abiotic Stresses in Wheat (Triticum aestivum L.) under the Changing Climate [J].
Hossain, Akbar ;
Skalicky, Milan ;
Brestic, Marian ;
Maitra, Sagar ;
Ashraful Alam, M. ;
Syed, M. Abu ;
Hossain, Jamil ;
Sarkar, Sukamal ;
Saha, Saikat ;
Bhadra, Preetha ;
Shankar, Tanmoy ;
Bhatt, Rajan ;
Kumar Chaki, Apurbo ;
EL Sabagh, Ayman ;
Islam, Tofazzal .
AGRONOMY-BASEL, 2021, 11 (02)
[48]   Computational identification of microRNAs and their targets in wheat (Triticum aestivum L.) [J].
Han YouSheng ;
Luan FuLei ;
Zhu HongLiang ;
Shao Yi ;
Chen AnJun ;
Lu ChengWen ;
Luo YunBo ;
Zhu BenZhong .
SCIENCE IN CHINA SERIES C-LIFE SCIENCES, 2009, 52 (11) :1091-1100
[49]   Functional and DNA–protein binding studies of WRKY transcription factors and their expression analysis in response to biotic and abiotic stress in wheat (Triticum aestivum L.) [J].
Lopamudra Satapathy ;
Dhananjay Kumar ;
Manish Kumar ;
Kunal Mukhopadhyay .
3 Biotech, 2018, 8
[50]   Genome-wide analysis and functional characterization of CHYR gene family associated with abiotic stress tolerance in bread wheat (Triticum aestivum L.) [J].
Hao Liu ;
Wenbo Yang ;
Xingli Zhao ;
Guozhang Kang ;
Na Li ;
Huawei Xu .
BMC Plant Biology, 22