Hierarchical processes in β-sheet peptide self-assembly from the microscopic to the mesoscopic level

被引:1
作者
Deng, Li [1 ]
Xu, Hai [1 ]
机构
[1] China Univ Petr East China, Ctr Bioengn & Biotechnol, Qingdao 266580, Peoples R China
基金
中国国家自然科学基金;
关键词
peptide; self-assembly; hierarchical process; nanostructures; AMYLOID-LIKE FIBRILS; DOCK-LOCK MECHANISM; HELICAL RIBBONS; NANOTUBES; PROTEIN; STABILITY; SEQUENCE; MODEL; NANOSTRUCTURES; HEPTAPEPTIDES;
D O I
10.1088/1674-1056/25/1/018701
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Under appropriate physicochemical conditions, short peptide fragments and their synthetic mimics have been shown to form elongated cross-beta nanostructures through self-assembly. The self-assembly process and the resultant peptide nanostructures are not only related to neurodegenerative diseases but also provide inspiration for the development of novel bionanomaterials. Both experimental and theoretical studies on peptide self-assembly have shown that the self-assembly process spans multiple time and length scales and is hierarchical. beta-sheet self-assembly consists of three sub-processes from the microscopic to the mesoscopic level: beta-sheet locking, lateral stacking, and morphological transformation. Detailed atomistic simulation studies have provided insight into the early stages of peptide nanostructure formation and the interplay between different non-covalent interactions at the microscopic level. This review gives a brief introduction of the hierarchical peptide self-assembly process and focuses on the roles of various non-covalent interactions in the sub-processes based on recent simulation, experimental, and theoretical studies.
引用
收藏
页数:7
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共 75 条
[1]   Direct Observation of Time-Resolved Polymorphic States in the Self-Assembly of End-Capped Heptapeptides [J].
Adamcik, Jozef ;
Castelletto, Valeria ;
Bolisetty, Sreenath ;
Hamley, Ian W. ;
Mezzenga, Raffaele .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2011, 50 (24) :5495-5498
[2]   Adjustable twisting periodic pitch of amyloid fibrils [J].
Adamcik, Jozef ;
Mezzenga, Raffaele .
SOFT MATTER, 2011, 7 (11) :5437-5443
[3]   Hierarchical self-assembly of chiral rod-like molecules as a model for peptide β-sheet tapes, ribbons, fibrils, and fibers [J].
Aggeli, A ;
Nyrkova, IA ;
Bell, M ;
Harding, R ;
Carrick, L ;
McLeish, TCB ;
Semenov, AN ;
Boden, N .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (21) :11857-11862
[4]   Geometry and Mechanics in the Opening of Chiral Seed Pods [J].
Armon, Shahaf ;
Efrati, Efi ;
Kupferman, Raz ;
Sharon, Eran .
SCIENCE, 2011, 333 (6050) :1726-1730
[5]   Universal Behavior in the Mesoscale Properties of Amyloid Fibrils [J].
Assenza, Salvatore ;
Adamcik, Jozef ;
Mezzenga, Raffaele ;
De Los Rios, Paolo .
PHYSICAL REVIEW LETTERS, 2014, 113 (26)
[6]   Self-Templated Nucleation in Peptide and Protein Aggregation [J].
Auer, Stefan ;
Dobson, Christopher M. ;
Vendruscolo, Michele ;
Maritan, Amos .
PHYSICAL REVIEW LETTERS, 2008, 101 (25)
[7]   What Determines the Structure and Stability of KFFE Monomers, Dimers, and Protofibrils? [J].
Bellesia, Giovanni ;
Shea, Joan-Emma .
BIOPHYSICAL JOURNAL, 2009, 96 (03) :875-886
[8]   The effect of increasing hydrophobicity on the self-assembly of amphipathic β-sheet peptides [J].
Bowerman, Charles J. ;
Ryan, Derek M. ;
Nissan, David A. ;
Nilsson, Bradley L. .
MOLECULAR BIOSYSTEMS, 2009, 5 (09) :1058-1069
[9]   Control of self-assembling oligopeptide matrix formation through systematic variation of amino acid sequence [J].
Caplan, MR ;
Schwartzfarb, EM ;
Zhang, SG ;
Kamm, RD ;
Lauffenburger, DA .
BIOMATERIALS, 2002, 23 (01) :219-227
[10]   Influence of Salt on the Self-Assembly of Two Model Amyloid Heptapeptides [J].
Castelletto, V. ;
Hamley, I. W. ;
Cenker, C. ;
Olsson, U. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2010, 114 (23) :8002-8008