BINER: A low-cost biomedical named entity recognition

被引:16
作者
Asghari, Mohsen [1 ]
Sierra-Sosa, Daniel [2 ]
Elmaghraby, Adel S. [1 ]
机构
[1] Univ Louisville, Dept Comp Sci & Engn, Louisville, KY USA
[2] Hood Coll, Dept Comp Sci & Informat Technol, Frederick, MD USA
关键词
Natural Language Processing; Named entity recognition; Deep learning; Biomedical text; Transfer Learning; Computational efficiency;
D O I
10.1016/j.ins.2022.04.037
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
A primary focus of the healthcare industry is to improve patient experience and quality of service. Practitioners and health workers are generating large volumes of text that are captured in Electronic Medical Records, clinical reports, and publications. Additionally, patients post millions of comments on social media related to healthcare, on diverse topics such as hospital services, disease symptoms, and drugs effects. Unifying various data sources can guide physicians and healthcare workers to avoid unnecessary, irrelevant information and expedite access to helpful information. The main challenge to creating Biomedical Natural Language Understanding is the lack of standard datasets and the extensive computational resources needed to develop different models. This paper proposes a model trained on low-tier GPU computers, producing comparable results to larger models like BioBERT. We propose BINER, a Biomedical Named Entity Recognition architecture using limited data and computational resources. (c) 2022 The Authors. Published by Elsevier Inc.
引用
收藏
页码:184 / 200
页数:17
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