Single-Molecule DNA Amplification and Analysis Using Microfluidics

被引:114
作者
Zhang, Chunsun
Da Xing [1 ]
机构
[1] S China Normal Univ, MOE Key Lab Laser Life Sci, Guangzhou 510631, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
POLYMERASE-CHAIN-REACTION; REAL-TIME PCR; ON-A-CHIP; NUCLEIC-ACID AMPLIFICATION; GENERATION SEQUENCING TECHNOLOGIES; MEDIATED ISOTHERMAL AMPLIFICATION; MITOCHONDRIAL GENOME SEQUENCE; IN-VITRO COMPARTMENTALIZATION; LOW-VOLUME AMPLIFICATION; MAREKS-DISEASE VIRUS;
D O I
10.1021/cr900081z
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Single-molecule DNA amplification and analysis has been studied within the confines of microfluidic reactors. With respect to new applications of single-molecule DNA amplification using microfluidics, the most immediately appealing perhaps lies in the field of sequencing. The existing ultrahigh-throughput sequencing technology can be further improved by use of small-sized monodisperse droplets engineered on chips, and the applications of droplet reactors in single-molecule nucleic acid amplification can be further opened up. It is even possible to envision microfluidic platforms capable of performing the entire process of single-molecule amplification and analysis, such as sample preparation of starting template, single-molecule amplification, sequence-specific or non-sequence-specific detection, and data analysis. Small volume operation and rapid thermal cycling have been the major motivations in the development of single-molecule DNA amplification and analysis using microfluidics.
引用
收藏
页码:4910 / 4947
页数:38
相关论文
共 418 条
  • [11] MicroRNA Discovery and Profiling in Human Embryonic Stem Cells by Deep Sequencing of Small RNA Libraries
    Bar, Merav
    Wyman, Stacia K.
    Fritz, Brian R.
    Qi, Junlin
    Garg, Kavita S.
    Parkin, Rachael K.
    Kroh, Evan M.
    Bendoraite, Ausra
    Mitchell, Patrick S.
    Nelson, Angelique M.
    Ruzzo, Walter L.
    Ware, Carol
    Radich, Jerald P.
    Gentleman, Robert
    Ruohola-Baker, Hannele
    Tewari, Muneesh
    [J]. STEM CELLS, 2008, 26 (10) : 2496 - 2505
  • [12] Large-scale identification of microRNAs from a basal eudicot (Eschscholzia californica) and conservation in flowering plants
    Barakat, Abdelali
    Wall, Kerr
    Leebens-Mack, Jim
    Wang, Yunjiao J.
    Carlson, John E.
    dePamphilis, Claude W.
    [J]. PLANT JOURNAL, 2007, 51 (06) : 991 - 1003
  • [13] SNP discovery via 454 transcriptome sequencing
    Barbazuk, W. Brad
    Emrich, Scott J.
    Chen, Hsin D.
    Li, Li
    Schnable, Patrick S.
    [J]. PLANT JOURNAL, 2007, 51 (05) : 910 - 918
  • [14] Profile of the Circulating DNA in Apparently Healthy Individuals
    Beck, Julia
    Urnovitz, Howard B.
    Riggert, Joachim
    Clerici, Mario
    Schuetz, Ekkehard
    [J]. CLINICAL CHEMISTRY, 2009, 55 (04) : 730 - 738
  • [15] On-chip single-copy real-time reverse-transcription PCR in isolated picoliter droplets
    Beer, N. Reginald
    Wheeler, Elizabeth K.
    Lee-Houghton, Lorenna
    Watkins, Nicholas
    Nasarabadi, Shanavaz
    Hebert, Nicole
    Leung, Patrick
    Arnold, Don W.
    Bailey, Christopher G.
    Colston, Bill W.
    [J]. ANALYTICAL CHEMISTRY, 2008, 80 (06) : 1854 - 1858
  • [16] On-chip, real-time, single-copy polymerase chain reaction in picoliter droplets
    Beer, N. Reginald
    Hindson, Benjamin J.
    Wheeler, Elizabeth K.
    Hall, Sara B.
    Rose, Klint A.
    Kennedy, Ian M.
    Colston, Bill W.
    [J]. ANALYTICAL CHEMISTRY, 2007, 79 (22) : 8471 - 8475
  • [17] Monodisperse droplet generation and rapid trapping for single molecule detection and reaction kinetics measurement
    Beer, Neil Reginald
    Rose, Klint Aaron
    Kennedy, Ian M.
    [J]. LAB ON A CHIP, 2009, 9 (06) : 841 - 844
  • [18] Observed velocity fluctuations in monodisperse droplet generators
    Beer, Neil Reginald
    Rose, Klint Aaron
    Kennedy, Ian M.
    [J]. LAB ON A CHIP, 2009, 9 (06) : 838 - 840
  • [19] Genomic DNA sequence comparison between two inbred soybean cyst nematode biotypes facilitated by massively parallel 454 micro-bead sequencing
    Bekal, Sadia
    Craig, J. P.
    Hudson, M. E.
    Niblack, T. L.
    Domier, L. L.
    Lambert, K. N.
    [J]. MOLECULAR GENETICS AND GENOMICS, 2008, 279 (05) : 535 - 543
  • [20] Infectious disease - PCR detection of bacteria in seven minutes
    Belgrader, P
    Benett, W
    Hadley, D
    Richards, J
    Stratton, P
    Mariella, R
    Milanovich, F
    [J]. SCIENCE, 1999, 284 (5413) : 449 - 450