Comparison of Solid-State Dipolar Couplings and Solution Relaxation Data Provides Insight into Protein Backbone Dynamics

被引:49
作者
Chevelkov, Veniamin [1 ,2 ]
Xue, Yi [1 ]
Linser, Rasmus [2 ]
Skrynnikov, Nikolai R. [1 ]
Reif, Bernd [2 ]
机构
[1] Purdue Univ, Dept Chem, W Lafayette, IN 47907 USA
[2] FMP, D-13125 Berlin, Germany
关键词
MODEL-FREE APPROACH; NMR-SPECTROSCOPY; CONFORMATIONAL FLEXIBILITY; STAPHYLOCOCCAL NUCLEASE; ORDER PARAMETERS; MOTION; FLUCTUATIONS; UBIQUITIN; CHAINS; MEDIA;
D O I
10.1021/ja100645k
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Analyses of solution N-15 relaxation data and solid-state H-1(N)-N-15 dipolar couplings from a small globular protein, alpha-spectrin SH3 domain, produce a surprisingly similar pattern of order parameters. This result suggests that there is little or no ns-mu s dynamics throughout most of the sequence and, in particular, in the structured portion of the backbone. At the same time, evidence of ns-mu s motions is found in the flexible loops and termini. These findings, corroborated by the MD simulations of alpha-spectrin SH3 in a hydrated crystalline environment and in solution, are consistent with the picture of protein dynamics that has recently emerged from the solution studies employing residual dipolar couplings.
引用
收藏
页码:5015 / +
页数:4
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