Roseomonas aestuarii sp nov., a bacteriochlorophyll-a containing alphaproteobacterium isolated from an estuarine habitat of India

被引:41
作者
Ramana, Venkata V. [1 ]
Sasikala, Ch [2 ]
Takaichi, S. [3 ]
Ramana, Ch V. [1 ]
机构
[1] Univ Hyderabad, Sch Life Sci, Dept Plant Sci, Hyderabad 500046, Andhra Pradesh, India
[2] JNT Univ, IST, Ctr Environm, Bacterial Discovery Lab, Hyderabad 500085, Andhra Pradesh, India
[3] Nippon Med Sch, Dept Biol, Kawasaki, Kanagawa 2110063, Japan
关键词
Roseomonas aestuarii sp nov; Alphaproteobacteria; Bchl-a; Polyphasic taxonomy; DEOXYRIBONUCLEIC-ACID; TEICHOCOCCUS-LUDIPUERITIAE; CONTAINING BACTERIA; MURICOCCUS-ROSEUS; GEN; NOV; WATER; IDENTIFICATION; PROPOSAL;
D O I
10.1016/j.syapm.2009.09.004
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Two strains (JC17(T) and JC19a) of orange pigmented bacteria were isolated from an estuarine sample. Cells of both the strains were Gram-negative coccobacilli, non-motile, non-spore forming and strictly aerobic. Chemo-organoheterotrophy was the growth mode for both strains and was possible on a wide range of organic compounds. Strains were non-hemolytic and contained low levels of BChl-a and carotenoids. The fatty acids (>1.0%) comprised C-18:1 omega 7c, C(16:)1 omega 7c/iso-C(15:0)2OH, C-16:0, C-16:0 3-OH, C(18:1)2OH, C-16:1 omega 5c, and C-19:0 cyclo omega 8c. The genomic DNA G+C content of strain JC17T was 66.2 mol%. A phylogenetic tree based on 16S rRNA gene sequence analysis showed that strains JC17T and JC19a had the highest similarity to members of the genus Roseomonas and were closely related to Roseomonas cervicalis CIP104027(T) (96.4%) and Roseomonas ludipueritiae CIP107418(T) (96.3%) of the family Acetobacteraceae within the class Alphaproteobacteria. Strains JC17T and JC19a shared 100% 16S rRNA gene sequence similarity, were phenotypically (morphological, physiological, biochemical characters) identical and had closely related genomes (85% DDH). Based on polyphasic taxonomic data, strain JC17(T) is classified as a novel species of the genus Roseomonas for which the name Roseomonas aestuarii sp. nov. is proposed. The type strain is JC17(T) (=CCUG 57456(T) =KCTC 22692(T) =NBRC105654(T)). (C) 2009 Elsevier GmbH. All rights reserved.
引用
收藏
页码:198 / 203
页数:6
相关论文
共 36 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]  
Biebl H., 1981, PROKARYOTES, P267, DOI DOI 10.1007/978-3-662-13187-9_14
[3]  
BRITTON G, 2004, CAROTENOIDS HDB MAIN, V31
[4]  
Brown AE., 2002, BENSONS MICROBIOLOGI
[5]  
Cappuccino J., 1998, MICROBIOLOGY LAB MAN, V5th
[6]   EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences [J].
Chun, Jongsik ;
Lee, Jae-Hak ;
Jung, Yoonyoung ;
Kim, Myungjin ;
Kim, Seil ;
Kim, Byung Kwon ;
Lim, Young-Woon .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :2259-2261
[7]  
COWAN S. T., 1965
[8]   Roseomonas stagni sp nov., isolated from pond water in Japan [J].
Furuhata, Katsunori ;
Miyamoto, Hiroshi ;
Goto, Keiichi ;
Kato, Yuko ;
Hara, Motonobu ;
Fukuyama, Masafumi .
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY, 2008, 54 (03) :167-171
[9]   Roseomonas aquatica sp nov., isolated from drinking water [J].
Gallego, Virginia ;
Sanchez-Porro, Cristina ;
Garcia, Maria Teresa ;
Ventosa, Antonio .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 :2291-2295
[10]   Bacteriologic characterization of 36 strains of Roseomonas species and proposal of Roseomonas mucosa sp nov and Roseomonas gilardii subsp rosea subsp nov [J].
Han, XY ;
Pham, AS ;
Tarrand, JJ ;
Rolston, KV ;
Helsel, LO ;
Levett, PN .
AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2003, 120 (02) :256-264