Enzyme structure with two catalytic sites for double-sieve selection of substrate

被引:314
作者
Nureki, O
Vassylyev, DG
Tateno, M
Shimada, A
Nakama, T
Fukai, S
Konno, M
Hendrickson, TL
Schimmel, P
Yokoyama, S
机构
[1] Univ Tokyo, Grad Sch Sci, Dept Biochem & Biophys, Bunkyo Ku, Tokyo 113, Japan
[2] RIKEN, Inst Phys & Chem Res, Wako, Saitama 35101, Japan
[3] Matsushita Elect Ind Co Ltd, Int Inst Adv Res, Cent Res Labs, Kyoto 61902, Japan
[4] Ochanomizu Univ, Fac Sci, Dept Chem, Bunkyo Ku, Tokyo 112, Japan
[5] Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA
关键词
D O I
10.1126/science.280.5363.578
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
High-fidelity transfers of genetic information in the central dogma can be achieved by a reaction called editing. The crystal structure of an enzyme with editing activity in translation is presented here at 2.5 angstroms resolution. The enzyme, isoleucyl-transfer RNA synthetase, activates not only the cognate substrate L-isoleucine but also the minimally distinct L-valine in the first, aminoacylation step. Then, in a second, "editing" step, the synthetase itself rapidly hydrolyzes only the valylated products. For this two-step substrate selection, a "double-sieve" mechanism has already been proposed. The present crystal structures of the synthetase in complexes with L-isoleucine and L-valine demonstrate that the first sieve is on the aminoacylation domain containing the Rossmann fold, whereas the second, editing sieve exists on a globular beta-barrel domain that protrudes from the aminoacylation domain.
引用
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页码:578 / 582
页数:5
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