Multi-OMICS: a critical technical perspective on integrative lipidomics approaches

被引:33
|
作者
Kopczynski, Dominik [1 ]
Coman, Cristina [1 ]
Zahedi, Rene P. [1 ]
Lorenz, Kristina [1 ,4 ]
Sickmann, Albert [1 ,2 ,3 ]
Ahrends, Robert [1 ]
机构
[1] Leibniz Inst Analyt Wissensch ISAS eV, Otto Hahn Str 6b, Dortmund, Germany
[2] Ruhr Univ Bochum, MPC, Med Fak, Bochum, Germany
[3] Univ Aberdeen, Coll Phys Sci, Dept Chem, Aberdeen, Scotland
[4] Univ Hosp Essen, West German Heart & Vasc Ctr Essen, Essen, Germany
关键词
GENE-EXPRESSION; PROTEIN; QUANTIFICATION; LIPIDS;
D O I
10.1016/j.bbalip.2017.02.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
During the past decades, high-throughput approaches for analyzing different molecular classes such as nucleic acids, proteins, metabolites, and lipids have grown rapidly. These approaches became powerful tools for getting a fundamental understanding of biological systems. Considering each approach and its results separately, relations and causal connections between these classes have no chance to be revealed, since only separate molecular snapshots are provided. Only a combined approach, not fully established yet, with the integration of the corresponding data, might yield a comprehensive and complete understanding of biological processes, such as crosstalk and interactions in signaling pathways. Taking two or more omics-methods into consideration for analysis is referred to as a multi-omics approach, which is gradually evolving. In this critical note, we briefly discuss the relevance, challenges, current state, and potential of data integration from multi-omics approaches, with a special focus on lipidomics analysis, listing the advantages and gaps in this field. This article is part of a Special Issue entitled: BBALIP_Lipidomics Opinion Articles edited by Sepp Kohlwein. (C) 2017 Elsevier B.V. All rights reserved.
引用
收藏
页码:808 / 811
页数:4
相关论文
共 50 条
  • [21] Bayesian integrative model for multi-omics data with missingness
    Fang, Zhou
    Ma, Tianzhou
    Tang, Gong
    Zhu, Li
    Yan, Qi
    Wang, Ting
    Celedon, Juan C.
    Chen, Wei
    Tseng, George C.
    BIOINFORMATICS, 2018, 34 (22) : 3801 - 3808
  • [22] Integrative Multi-omics Analysis of Childhood Aggressive Behavior
    Fiona A. Hagenbeek
    Jenny van Dongen
    René Pool
    Peter J. Roetman
    Amy C. Harms
    Jouke Jan Hottenga
    Cornelis Kluft
    Olivier F. Colins
    Catharina E. M. van Beijsterveldt
    Vassilios Fanos
    Erik A. Ehli
    Thomas Hankemeier
    Robert R. J. M. Vermeiren
    Meike Bartels
    Sébastien Déjean
    Dorret I. Boomsma
    Behavior Genetics, 2023, 53 : 101 - 117
  • [23] Integrative multi-omics approach to targeted therapy for glioblastoma
    Koh, Lynnette
    Novera, Wisna
    Lim, See Wee
    Chong, Yuk Kien
    Pang, Qing You
    Low, David
    Ang, Beng Ti
    Tang, Carol
    PHARMACOLOGICAL RESEARCH, 2022, 182
  • [24] Integrative multi-omics approach to targeted therapy for glioblastoma
    Koh, Lynnette
    Novera, Wisna
    Lim, See Wee
    Chong, Yuk Kien
    Pang, Qing You
    Low, David
    Ang, Beng Ti
    Tang, Carol
    PHARMACOLOGICAL RESEARCH, 2022, 182
  • [25] Anticipation of Precision Diabetes and Promise of Integrative Multi-Omics
    Liu, Chang
    Sun, Yan, V
    ENDOCRINOLOGY AND METABOLISM CLINICS OF NORTH AMERICA, 2021, 50 (03) : 559 - 574
  • [26] Integrative analysis of multi-omics data for liquid biopsy
    Chen, Geng
    Zhang, Jing
    Fu, Qiaoting
    Taly, Valerie
    Tan, Fei
    BRITISH JOURNAL OF CANCER, 2023, 128 (04) : 702 - 702
  • [27] Integrative multi-omics analysis of intestinal organoid differentiation
    Lindeboom, Rik G. H.
    van Voorthuijsen, Lisa
    Oost, Koen C.
    Rodriguez-Colman, Maria J.
    Luna-Velez, Maria V.
    Furlan, Cristina
    Baraille, Floriane
    Jansen, Pascal W. T. C.
    Ribeiro, Agnes
    Burgering, Boudewijn M. T.
    Snippert, Hugo J.
    Vermeulen, Michiel
    MOLECULAR SYSTEMS BIOLOGY, 2018, 14 (06)
  • [28] An integrative imputation method based on multi-omics datasets
    Lin, Dongdong
    Zhang, Jigang
    Li, Jingyao
    Xu, Chao
    Deng, Hong-Wen
    Wang, Yu-Ping
    BMC BIOINFORMATICS, 2016, 17
  • [29] Network approaches to systems biology analysis of complex disease: integrative methods for multi-omics data
    Yan, Jingwen
    Risacher, Shannon L.
    Shen, Li
    Saykin, Andrew J.
    BRIEFINGS IN BIOINFORMATICS, 2018, 19 (06) : 1370 - 1381
  • [30] Multi-omics approaches to therapeutic target identification
    Hassan, Md Imtaiyaz
    BRIEFINGS IN FUNCTIONAL GENOMICS, 2023, 22 (02) : 75 - 75