Harmonizing Prokaryotic Nomenclature: Fixing the Fuss over Phylum Name Flipping

被引:0
作者
Panda, Adyasha [1 ]
Islam, Salim T. [2 ,3 ]
Sharma, Gaurav [1 ]
机构
[1] Inst Bioinformat & Appl Biotechnol IBAB, Bengaluru, Karnataka, India
[2] Univ Quebec, Inst Pasteur Int Network, Ctr Armand Frappier Sante Biotechnol, Inst Natl Rech Sci INRS, Laval, PQ, Canada
[3] Univ Laval, Quebec Network Res Prot Funct Engn & Applicat, PROTEO, Quebec City, PQ, Canada
来源
MBIO | 2022年
基金
加拿大自然科学与工程研究理事会;
关键词
taxonomy; nomenclature; systematics; classification; Bacteria; Archaea; International Code of Nomenclature of Prokaryotes (ICNP); polyphasic taxonomy;
D O I
10.1038/mbio.00970-22
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Lloyd and Tahon recently criticized proposed bacterial phylum nomenclature changes (K.G. Lloyd, G. Tahon, Nat Rev Microbiol 20:123-124, 2022, https://doi.org/10.1038/s41579-022-00684-2) precipitated by the International Committee on Systematics of Prokaryotes (ICSP)'s official recognition of phylum nomenclature rules. Here, we extend the critique. While we applaud bringing consistency to phylum names, we prognosticate what this minute but momentous change entails for the future of microbial nomenclature and how this will sow confusion among researchers. Several pitfalls of the proposed ICSP framework-based nomenclature are also detailed, including (i) improper type genus name and suffix usage, (ii) loss of Bacteria/Archaea distinctions, (iii) disruption of major phylum name prefixes, and (iv) absence of organism name prevalidation. Finally, we suggest new names for the key bacterial phyla Proteobacteria (Proteobacteriota), Firmicutes (Firmicuteota), Actinobacteria (Actinobacteriota), and Tenericutes (Tenericuteota), while keeping the archaeal phylum names Crenarchaeota, Thaumarchaeota, and Euryarchaeota. Together, these changes will help researchers attain chaos-free uniform nomenclature.
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页数:6
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