Genome Sequence of Listeria innocua Strain MEZLIS26, Isolated from a Goat in South Africa

被引：5

作者：

El Zowalaty, Mohamed E. ^{[1
,2
,3
,4
]}

Hickman, Rachel A. ^{[5
]}

Moura, Alexandra ^{[6
,7
,8
,9
]}

Lecuit, Marc ^{[6
,7
,8
,9
,10
]}

Zishiri, Oliver T. ^{[11
]}

Noyes, Noelle ^{[12
]}

Jarhult, Josef D. ^{[5
]}

机构：

[1] St Jude Childrens Res Hosp, Dept Infect Dis, 332 N Lauderdale St, Memphis, TN 38105 USA

[2] Univ KwaZulu Natal, Coll Hlth Sci, Sch Hlth Sci, Virol & Microbiol Res Grp, Westville Campus, Durban, South Africa

[3] Univ Sharjah, Sharjah Med Res Inst, Infect Dis & Antiinfect Therapy Res Grp, Sharjah, U Arab Emirates

[4] Univ Sharjah, Coll Pharm, Sharjah, U Arab Emirates

[5] Uppsala Univ, Zoonosis Sci Ctr, Dept Med Sci, Uppsala, Sweden

[6] Inst Pasteur, Natl Reference Ctr, Paris, France

[7] World Hlth Org Collaborating Ctr Listeria, Paris, France

[8] Biol Infect Unit, Inst Pasteur, Paris, France

[9] Inserm U1117, Paris, France

[10] Univ Paris, Inst Imagine, Necker Enfants Malad Univ Hosp, AP HP,Div Infect Dis & Trop Med, Paris, France

[11] Univ KwaZulu Natal, Coll Agr Engn & Sci, Sch Life Sci, Discipline Genet, Durban, South Africa

[12] Univ Minnesota, Coll Vet Med, Dept Vet Populat Med, St Paul, MN 55108 USA

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2019年 / 8卷 / 44期

基金：

瑞典研究理事会; 美国国家卫生研究院; 新加坡国家研究基金会;

关键词：

MONOCYTOGENES; TOOL;

D O I：

10.1128/MRA.00991-19

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Here, we report the draft genome sequence of Listeria innocua strain MEZLIS26, isolated from a healthy goat in Flagstaff, Eastern Cape Province, South Africa. The genome was sequenced using the Illumina MiSeq platform and had a length of 2,800,777 bp, with a G+C content of 37.4%, 2,755 coding DNA sequences (CDSs), 49 transfer RNAs (tRNAs), and 4 noncoding RNAs (ncRNAs).

引用

页数：4

共 17 条

[1] Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua:: clues for evolution and pathogenicity [J].

Buchrieser, C ;

Rusniok, C ;

Kunst, F ;

Cossart, P ;

Glaser, P .

FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY, 2003, 35 (03) :207-213

[2]

Favaro M., 2014, JMM case reports, V1, pe003103, DOI [10.1099/jmmcr.0.003103, DOI 10.1099/JMMCR.0.003103]

[3] DNA-DNA hybridization values and their relationship to whole-genome sequence similarities [J].

Goris, Johan ;

Konstantinidis, Konstantinos T. ;

Klappenbach, Joel A. ;

Coenye, Tom ;

Vandamme, Peter ;

Tiedje, James M. .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :81-91

[4] QUAST: quality assessment tool for genome assemblies [J].

Gurevich, Alexey ;

Saveliev, Vladislav ;

Vyahhi, Nikolay ;

Tesler, Glenn .

BIOINFORMATICS, 2013, 29 (08) :1072-1075

[5]

Hoffman S., 2015, Economic Burden of Major Foodborne Illnesses Acquired in the United States

[6] Exploring specific primers targeted against different genes for a multiplex PCR for detection of Listeria monocytogenes [J].

Kumar, Ashwani ;

Grover, Sunita ;

Batish, Virender Kumar .

3 BIOTECH, 2015, 5 (03) :261-269

[7] Listeria thailandensis sp. nov. [J].

Leclercq, Alexandre ;

Moura, Alexandra ;

Vales, Guillaume ;

Tessaud-Rita, Nathalie ;

Aguilhon, Christine ;

Lecuit, Marc .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (01) :74-81

[8]

Letunic I, 2011, NUCLEIC ACIDS RES, V39, pW475, DOI [10.1093/nar/gkr201, 10.1093/nar/gkr931]

[9]

Martin M., 2011, EMBNET J, V17, P10, DOI DOI 10.14806/EJ.17.1.200

[10] Atypical Hemolytic Listeria innocua Isolates Are Virulent, albeit Less than Listeria monocytogenes [J].

Moura, Alexandra ;

Disson, Olivier ;

Lavina, Morgane ;

Thouvenot, Pierre ;

Huang, Lei ;

Leclercq, Alexandre ;

Fredriksson-Ahomaa, Maria ;

Eshwar, Athmanya K. ;

Stephan, Roger ;

Lecuit, Marc .

INFECTION AND IMMUNITY, 2019, 87 (04)

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