Distribution-based imaging for multiple sclerosis lesion segmentation using specialized fuzzy 2-means powered by Nakagami transmutations

被引:11
作者
Alpar, Orcan [1 ]
Krejcar, Ondrej [1 ]
Dolezal, Rafael [2 ]
机构
[1] Univ Hradec Kralove, Fac Informat & Management, Ctr Basic & Appl Res, Rokitanskeho 62, Hradec Kralove 50003, Czech Republic
[2] Univ Hosp Hradec Kralove, Biomed Res Ctr, Sokolska 581, Hradec Kralove 50005, Czech Republic
关键词
Distribution-based imaging; Fuzzy c-means; Multiple Sclerosis; MICCAI; 2016; Segmentation; INTENSITY FOCUSED ULTRASOUND; THERMAL LESIONS; BACKSCATTERING; STATISTICS; FIBROSIS; MODEL;
D O I
10.1016/j.asoc.2021.107481
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Distribution-based imaging is a promising methodology mainly to differentiate suspicious regions from surrounding tissues by applying a distribution to the images vertically or horizontally, ideally in both directions. The methodology is very useful for contouring and highlighting desired regions even under near-zero contrast conditions; it also leads to flexible segmentation of the lesions by parametric kernels and provides robust results when supported by solid post-segmentation protocols. Given these benefits, what we propose in this research is a specialized fuzzy 2-means algorithm enhanced by parametric distribution-based imaging framework to offer novel solutions for multiple-sclerosis (MS) identification and segmentation from flair MRI images. The interchangeable distributions employed in this research are Rayleigh, Weibull, Gamma, Exponential and Chi-square, which all are mathematically transmuted from Nakagami distribution. The Nakagami m-parameter is defining the shape of the distributions unless a special parameter exists; while the highlighted areas are segmented by fuzzy 2-means. All parameters are optimized using a set of MICCAI 2016 MS lesion segmentation challenge taken by Siemens Verio 3T scanner and 0.8245 dice score is achieved by Nakagami-Gamma. However, when the optimized framework is tested by other 4 sets with same resolution and size properties, the highest average dice score 0.7113 is obtained by Nakagami-Rayleigh; while Nakagami-Gamma transmutation is resulted in 0.7112 dice score with significantly better sensitivity. (C) 2021 Elsevier B.V. All rights reserved.
引用
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页数:14
相关论文
共 69 条
[1]   Unsupervised Domain Adaptation With Optimal Transport in Multi-Site Segmentation of Multiple Sclerosis Lesions From MRI Data [J].
Ackaouy, Antoine ;
Courty, Nicolas ;
Vallee, Emmanuel ;
Commowick, Olivier ;
Barillot, Christian ;
Galassi, Francesca .
FRONTIERS IN COMPUTATIONAL NEUROSCIENCE, 2020, 14
[2]   Thermal Imaging for Localization of Anterior Forearm Subcutaneous Veins [J].
Alpar, Orcan ;
Krejcar, Ondrej .
BIOINFORMATICS AND BIOMEDICAL ENGINEERING (IWBBIO 2018), PT II, 2019, 10814 :243-254
[3]  
Alpar O., 2018, INT C BIOINFORMATICS, P255
[4]   Monitoring and fuzzy warning system for risk prevention of Guyon's canal syndrome [J].
Alpar, Orcan .
BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 2021, 64
[5]   Nakagami imaging with related distributions for advanced thermogram pseudocolorization [J].
Alpar, Orcan .
JOURNAL OF THERMAL BIOLOGY, 2020, 93
[6]   A novel fuzzy curvature method for recognition of anterior forearm subcutaneous veins by thermal imaging [J].
Alpar, Orcan .
EXPERT SYSTEMS WITH APPLICATIONS, 2019, 120 :33-42
[7]   A Comparative Study on Chrominance Based Methods in Dorsal Hand Recognition: Single Image Case [J].
Alpar, Orcan ;
Krejcar, Ondrej .
RECENT TRENDS AND FUTURE TECHNOLOGY IN APPLIED INTELLIGENCE, IEA/AIE 2018, 2018, 10868 :711-721
[8]   Fuzzy Warning System against Ulnar Nerve Entrapment [J].
Alpar, Orcan ;
Krejcar, Ondrej .
2017 IEEE INTERNATIONAL CONFERENCE ON FUZZY SYSTEMS (FUZZ-IEEE), 2017,
[9]   Quantization and Equalization of Pseudocolor Images in Hand Thermography [J].
Alpar, Orcan ;
Krejcar, Ondrej .
BIOINFORMATICS AND BIOMEDICAL ENGINEERING, IWBBIO 2017, PT I, 2017, 10208 :397-407
[10]   Superficial Dorsal Hand Vein Estimation [J].
Alpar, Orcan ;
Krejcar, Ondrej .
BIOINFORMATICS AND BIOMEDICAL ENGINEERING, IWBBIO 2017, PT I, 2017, 10208 :408-418