Optofluidic Flow-Through Biosensor Sensitivity - Model and Experiment

被引:0
作者
Wright, Joel G., Jr. [1 ]
Amin, Md Nafiz [2 ]
Meena, Gopikrishnan G. [2 ]
Schmidt, Holger [2 ]
Hawkins, Aaron R. [1 ]
机构
[1] Brigham Young Univ, Dept Elect & Comp Engn, Provo, UT 84602 USA
[2] Univ Calif Santa Cruz, Sch Engn, Santa Cruz, CA 95064 USA
关键词
Optical waveguides; Fluorescence; Biosensors; Photonics; Biological system modeling; Predictive models; Transmission line matrix methods; Anti-resonant reflecting optical waveguides (ARROW); integrated waveguides; model design; optofluidics; predictive simulation; WAVE-GUIDES;
D O I
10.1109/JLT.2021.3061872
中图分类号
TM [电工技术]; TN [电子技术、通信技术];
学科分类号
0808 ; 0809 ;
摘要
We present a model and simulation for predicting the detected signal of a fluorescence-based optical biosensor built from optofluidic waveguides. Typical applications include flow experiments to determine pathogen concentrations in a biological sample after tagging relevant DNA or RNA sequences. An overview of the biosensor geometry and fabrication processes is presented. The basis for the predictive model is also outlined. The model is then compared to experimental results for three different biosensor designs. The model is shown to have similar signal statistics as physical tests, illustrating utility as a pre-fabrication design tool and as a predictor of detection sensitivity.
引用
收藏
页码:3330 / 3340
页数:11
相关论文
共 24 条
  • [1] Enhanced Detection of Single Viruses On-Chip via Hydrodynamic Focusing
    Black, Jennifer A.
    Hamilton, Erik
    Hueros, Raul A. Reyes
    Parks, Joshua W.
    Hawkins, Aaron R.
    Schmidt, Holger
    [J]. IEEE JOURNAL OF SELECTED TOPICS IN QUANTUM ELECTRONICS, 2019, 25 (01)
  • [2] On-chip wavelength multiplexed detection of cancer DNA biomarkers in blood
    Cai, H.
    Stott, M. A.
    Ozcelik, D.
    Parks, J. W.
    Hawkins, A. R.
    Schmidt, H.
    [J]. BIOMICROFLUIDICS, 2016, 10 (06):
  • [3] Optofluidic analysis system for amplification-free, direct detection of Ebola infection
    Cai, H.
    Parks, J. W.
    Wall, T. A.
    Stott, M. A.
    Stambaugh, A.
    Alfson, K.
    Griffiths, A.
    Mathies, R. A.
    Carrion, R.
    Patterson, J. L.
    Hawkins, A. R.
    Schmidt, H.
    [J]. SCIENTIFIC REPORTS, 2015, 5
  • [4] Multiplexed efficient on-chip sample preparation and sensitive amplification-free detection of Ebola virus
    Du, K.
    Cai, H.
    Park, M.
    Wall, T. A.
    Stott, M. A.
    Alfson, K. J.
    Griffiths, A.
    Carrion, R.
    Patterson, J. L.
    Hawkins, A. R.
    Schmidt, H.
    Mathies, R. A.
    [J]. BIOSENSORS & BIOELECTRONICS, 2017, 91 : 489 - 496
  • [5] ANTIRESONANT REFLECTING OPTICAL WAVE-GUIDES IN SIO2-SI MULTILAYER STRUCTURES
    DUGUAY, MA
    KOKUBUN, Y
    KOCH, TL
    PFEIFFER, L
    [J]. APPLIED PHYSICS LETTERS, 1986, 49 (01) : 13 - 15
  • [6] Goktolga M.U., Fully developed velocity profile for rectangular ducts
  • [7] Horn R.A., 2013, Matrix Analysis, V2nd, P371
  • [8] VALIDATION AND EXTENSION TO 3 DIMENSIONS OF THE BERENGER PML ABSORBING BOUNDARY-CONDITION FOR FD-TD MESHES
    KATZ, DS
    THIELE, ET
    TAFLOVE, A
    [J]. IEEE MICROWAVE AND GUIDED WAVE LETTERS, 1994, 4 (08): : 268 - 270
  • [9] Lakovicz J.R.:., 2006, Principles of Fluorescence Spectroscopy, P9
  • [10] Lakowicz J.R., 2006, Principles of Fluorescence Spectroscopy, V3rd, P59