Flavobacterium algicola sp nov., isolated from marine algae

被引:35
作者
Miyashita, Mika [2 ]
Fujimura, Shuki [3 ]
Nakagawa, Yasuyoshi [2 ]
Nishizawa, Makoto [3 ]
Tomizuka, Noboru [3 ]
Nakagawa, Tomoyuki [1 ]
Nakagawa, Junichi [3 ]
机构
[1] Gifu Univ, Fac Appl Biol Sci, Gifu 5011193, Japan
[2] Natl Inst Technol & Evaluat, Dept Biotechnol, Biol Resource Ctr NBRC, Chiba 2920818, Japan
[3] Tokyo Univ Agr, Fac Bioindustry, Dept Food Sci & Technol, Abashiri, Hokkaido 0992493, Japan
基金
日本科学技术振兴机构;
关键词
ANTARCTIC LAKES; MICROBIAL MATS; RIBOSOMAL-RNA; DEOXYRIBONUCLEIC-ACID; EMENDED DESCRIPTION; BACTERIUM; SEQUENCE; 16S; PSYCHROPHILES; FUCOIDAN;
D O I
10.1099/ijs.0.009365-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A rod-shaped Gram-staining-negative, non-motile, aerobic and fucoidan-digesting strain, designated TC2(T), was isolated from marine algae collected from the coast of the Sea of Okhotsk at Abashiri, Hokkaido, Japan. The bacterium formed yellow, translucent, circular and convex colonies. Comparative 16S rRNA gene sequence analysis indicated that the strain belonged to the genus Flavobacterium, with the highest sequence similarities of 97.1 to 97.3% to the type strains of Flavobacterium frigidarium, Flavobacterium frigoris, Flavobacterium limicola and Flavobacterium psychrolimnae. DNA-DNA relatedness values between strain TC2(T) and the above-mentioned species were lower than 28%. The genomic DNA G + C content was 33.9 mol%. The major respiratory quinone was menaquinone-6 and the predominant fatty acids were iso-C-15:1 G, iso-C-15:0, iso-C-15:0 3-OH and summed feature 3 (which comprises iso-C-15:0 2-OH and/or C-16:1 omega 7c). Strain TC2(T) could be differentiated from related species by several phenotypic characteristics. Thus, on the basis of these results, strain TC2(T) represents a novel species of the genus Flavobacterium, for which the name Flavobacterium algicola sp. nov. is proposed. The type strain is TC2(T) (=NBRC 102673(T) =CIP 109574(T)).
引用
收藏
页码:344 / 348
页数:5
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