A dual meta-learning framework based on idle data for enhancing segmentation of pancreatic cancer

被引:13
作者
Li, Jun [1 ]
Qi, Liang [2 ]
Chen, Qingzhong [1 ]
Zhang, Yu-Dong [2 ]
Qian, Xiaohua [1 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Biomed Engn, Shanghai 200030, Peoples R China
[2] Nanjing Med Univ, Affiliated Hosp 1, Dept Radiol, Nanjing 210009, Peoples R China
基金
中国国家自然科学基金; 上海市自然科学基金;
关键词
Pancreatic cancer segmentation; Idle data; Dual meta-learning; Random style transfer; ADAPTATION; IMAGE; CT;
D O I
10.1016/j.media.2021.102342
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Automated segmentation of pancreatic cancer is vital for clinical diagnosis and treatment. However, the small size and inconspicuous boundaries limit the segmentation performance, which is further exacerbated for deep learning techniques with the few training samples due to the high threshold of image acquisition and annotation. To alleviate this issue caused by the small-scale dataset, we collect idle multi-parametric MRIs of pancreatic cancer from different studies to construct a relatively large dataset for enhancing the CT pancreatic cancer segmentation. Therefore, we propose a deep learning segmentation model with the dual meta-learning framework for pancreatic cancer. It can integrate the common knowledge of tumors obtained from idle MRIs and salient knowledge from CT images, making high-level features more discriminative. Specifically, the random intermediate modalities between MRIs and CT are first generated to smoothly fill in the gaps in visual appearance and provide rich intermediate representations for ensuing meta-learning scheme. Subsequently, we employ intermediate modalities-based model-agnostic meta-learning to capture and transfer commonalities. At last, a meta-optimizer is utilized to adaptively learn the salient features within CT data, thus alleviating the interference due to internal differences. Com prehensive experimental results demonstrated our method achieved the promising segmentation performance, with a max Dice score of 64.94% on our private dataset, and outperformed state-of-the-art methods on a public pancreatic cancer CT dataset. The proposed method is an effective pancreatic cancer segmentation framework, which can be easily integrated into other segmentation networks and thus promises to be a potential paradigm for alleviating data scarcity challenges using idle data.(c) 2022 Elsevier B.V. All rights reserved.
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页数:12
相关论文
共 44 条
  • [1] Survival Prediction in Pancreatic Ductal Adenocarcinoma by Quantitative Computed Tomography Image Analysis
    Attiyeh, Marc A.
    Chakraborty, Jayasree
    Doussot, Alexandre
    Langdon-Embry, Liana
    Mainarich, Shiana
    Gonen, Mithat
    Balachandran, Vinod P.
    D'Angelica, Michael I.
    DeMatteo, Ronald P.
    Jarnagin, William R.
    Kingham, T. Peter
    Allen, Peter J.
    Simpson, Amber L.
    Do, Richard K.
    [J]. ANNALS OF SURGICAL ONCOLOGY, 2018, 25 (04) : 1034 - 1042
  • [2] Meta-Seg: A Generalized Meta-Learning Framework for Multi-Class Few-Shot Semantic Segmentation
    Cao, Zhiying
    Zhang, Tengfei
    Diao, Wenhui
    Zhang, Yue
    Lyu, Xiaode
    Fu, Kun
    Sun, Xian
    [J]. IEEE ACCESS, 2019, 7 : 166109 - 166121
  • [3] Preliminary study of tumor heterogeneity in imaging predicts two year survival in pancreatic cancer patients
    Chakraborty, Jayasree
    Langdon-Embry, Liana
    Cunanan, Kristen M.
    Escalon, Joanna G.
    Allen, Peter J.
    Lowery, Maeve A.
    O'Reilly, Eileen M.
    Gonen, Mithat
    Do, Richard G.
    Simpson, Amber L.
    [J]. PLOS ONE, 2017, 12 (12):
  • [4] Unsupervised Bidirectional Cross-Modality Adaptation via Deeply Synergistic Image and Feature Alignment for Medical Image Segmentation
    Chen, Cheng
    Dou, Qi
    Chen, Hao
    Qin, Jing
    Heng, Pheng Ann
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2020, 39 (07) : 2494 - 2505
  • [5] Combined Spiral Transformation and Model-Driven Multi-Modal Deep Learning Scheme for Automatic Prediction of TP53 Mutation in Pancreatic Cancer
    Chen, Xiahan
    Lin, Xiaozhu
    Shen, Qing
    Qian, Xiaohua
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2021, 40 (02) : 735 - 747
  • [6] Chen Y., 2018, ADV NEURAL INFORM PR, V352
  • [7] Flowing on Riemannian Manifold: Domain Adaptation by Shifting Covariance
    Cui, Zhen
    Li, Wen
    Xu, Dong
    Shan, Shiguang
    Chen, Xilin
    Li, Xuelong
    [J]. IEEE TRANSACTIONS ON CYBERNETICS, 2014, 44 (12) : 2264 - 2273
  • [8] Dou Q, 2019, ADV NEUR IN, V32
  • [9] Duchi J, 2011, J MACH LEARN RES, V12, P2121
  • [10] Finn C, 2017, PR MACH LEARN RES, V70