A Preliminary Study on Cell Motility Analysis from Phase-Contrast Microscopy Image Series

被引:0
作者
Kayan, Emre [1 ]
Kavusan, Tarik [1 ]
Onal, Sevgi [2 ]
Okvur, Devrim P. [3 ]
Ozuysal, Ozden Y. [3 ]
Toreyin, Behcet Ugur [4 ]
Unay, Devrim [1 ]
机构
[1] Izmir Demokrasi Univ, Elekt Elekt Muh, Izmir, Turkey
[2] Izmir Yuksek Teknol Enstitusu, Biyoteknol, Izmir, Turkey
[3] Izmir Yuksek Teknol Enstitusu, Mol Biyol & Genet Bolumu, Izmir, Turkey
[4] Istanbul Tech Univ, Bilisim Enstitusu, Istanbul, Turkey
来源
2020 MEDICAL TECHNOLOGIES CONGRESS (TIPTEKNO) | 2020年
关键词
cell motility; phase-contrast optical microscopy; image processing; deep learning; TRACKING; SEGMENTATION;
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Analyses of morphology, polarity, and motility of cells is important for cell biology research such as metastatic and invasive capacity of cells, wound healing, and embryonic development. Automation of such analyses using image series of phase-contrast optical microscopy, which allows label-free imaging of live cells in their living environment, is a need. With this purpose, in this study image series of a cell motility experiment is manually annotated, and an automation algorithm realizing motion and shape analyses of cells using the annotated data is developed. In addition, due to the low number of annotated data at hand, a U-Net based solution is devised for automated segmentation of the cells and its performance is evaluated.
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页数:4
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