Sequence-specific polypeptoids: A diverse family of heteropolymers with stable secondary structure

被引:423
作者
Kirshenbaum, K
Barron, AE
Goldsmith, RA
Armand, P
Bradley, EK
Truong, KTV
Dill, KA
Cohen, FE
Zuckermann, RN
机构
[1] Chiron Corp, Emeryville, CA 94608 USA
[2] Univ Calif San Francisco, Dept Pharmaceut Chem, San Francisco, CA 94143 USA
[3] Univ Calif San Francisco, Dept Biomed Sci, San Francisco, CA 94143 USA
[4] Univ Calif San Francisco, Dept Cellular & Mol Pharmacol, San Francisco, CA 94143 USA
[5] Univ Calif San Francisco, Dept Med, San Francisco, CA 94143 USA
关键词
D O I
10.1073/pnas.95.8.4303
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We have synthesized and characterized a family of structured oligo-N-substituted-glycines (peptoids) up to 36 residues in length by using an efficient solid-phase protocol to incorporate chemically diverse side chains in a sequence-specific fashion. We investigated polypeptoids containing side chains with a chiral center adjacent to the main chain nitrogen. Some of these sequences have stable secondary structure, despite the achirality of the polymer backbone and its lack of hydrogen bond donors. In both aqueous and organic solvents, peptoid oligomers as short as five residues give rise to CD spectra that strongly resemble those of peptide alpha-helices. Differential scanning calorimetry and CD measurements show that polypeptoid secondary structure is highly stable and that unfolding is reversible and cooperative. Thermodynamic parameters obtained for unfolding are similar to those obtained for the alpha-helix to coil transitions of peptides. This class of biomimetic polymers may enable the design of self-assembling macromolecules with novel structures and functions.
引用
收藏
页码:4303 / 4308
页数:6
相关论文
共 32 条
  • [1] APELLA DH, 1996, J AM CHEM SOC, V118, P13701
  • [2] Chiral N-substituted glycines can form stable helical conformations
    Armand, P
    Kirshenbaum, K
    Falicov, A
    Dunbrack, RL
    Dill, KA
    Zuckermann, RN
    Cohen, FE
    [J]. FOLDING & DESIGN, 1997, 2 (06): : 369 - 375
  • [3] NMR determination of the major solution conformation of a peptoid pentamer with chiral side chains
    Armand, P
    Kirshenbaum, K
    Goldsmith, RA
    Farr-Jones, S
    Barron, AE
    Truong, KTV
    Dill, KA
    Mierke, DF
    Cohen, FE
    Zuckermann, RN
    Bradley, EK
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (08) : 4309 - 4314
  • [4] NMR structural characterization of oligo-N-substituted glycine lead compounds from a combinatorial library
    Bradley, EK
    Kerr, JM
    Richter, LS
    Figliozzi, GM
    Goff, DA
    Zuckermann, RN
    Spellmeyer, DC
    Blaney, JM
    [J]. MOLECULAR DIVERSITY, 1997, 3 (01) : 1 - 15
  • [5] STUDIES OF SYNTHETIC HELICAL PEPTIDES USING CIRCULAR-DICHROISM AND NUCLEAR-MAGNETIC-RESONANCE
    BRADLEY, EK
    THOMASON, JF
    COHEN, FE
    KOSEN, PA
    KUNTZ, ID
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (04) : 607 - 622
  • [6] AN UNNATURAL BIOPOLYMER
    CHO, CY
    MORAN, EJ
    CHERRY, SR
    STEPHANS, JC
    FODOR, SPA
    ADAMS, CL
    SUNDARAM, A
    JACOBS, JW
    SCHULTZ, PG
    [J]. SCIENCE, 1993, 261 (5126) : 1303 - 1305
  • [7] THEORY FOR THE FOLDING AND STABILITY OF GLOBULAR-PROTEINS
    DILL, KA
    [J]. BIOCHEMISTRY, 1985, 24 (06) : 1501 - 1509
  • [8] DILL KA, 1995, PROTEIN SCI, V4, P561
  • [9] REASSESSMENT OF THE RANDOM COIL CONFORMATION - VIBRATIONAL CD STUDY OF PROLINE OLIGOPEPTIDES AND RELATED POLYPEPTIDES
    DUKOR, RK
    KEIDERLING, TA
    [J]. BIOPOLYMERS, 1991, 31 (14) : 1747 - 1761
  • [10] PEPTIDE NUCLEIC-ACIDS (PNA) - OLIGONUCLEOTIDE ANALOGS WITH AN ACHIRAL PEPTIDE BACKBONE
    EGHOLM, M
    BUCHARDT, O
    NIELSEN, PE
    BERG, RH
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (05) : 1895 - 1897