Inter-Phase 4D Cardiac MRI Registration With a Motion Prior Derived From CTA

被引:2
作者
Sang, Yudi [1 ,2 ]
Cao, Minsong [2 ]
McNitt-Gray, Michael [2 ,3 ]
Gao, Yu [2 ]
Hu, Peng [2 ,3 ]
Yan, Ran [3 ]
Yang, Yingli [2 ]
Ruan, Dan [1 ,2 ,3 ]
机构
[1] Univ Calif Los Angeles, Dept Bioengn, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Dept Radiat Oncol, Los Angeles, CA 90095 USA
[3] Univ Calif Los Angeles, Phys & Biol Med Grad Program, Los Angeles, CA 90095 USA
关键词
Magnetic resonance imaging; Training; Strain; Jacobian matrices; Computed tomography; Myocardium; Arteries; Deep Learning; image registration; motion prior model; 4D cardiac MRI; IMAGE REGISTRATION; QUANTIFICATION; FRAMEWORK;
D O I
10.1109/TBME.2021.3127158
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Objective: Registration between phases in 4D cardiac MRI is essential for reconstructing high-quality images and appreciating the dynamics. Complex motion and limited image quality make it challenging to design regularization functionals. We propose to introduce a motion representation model (MRM) into a registration network to impose customized, site-specific, and spatially variant prior for cardiac motion. Methods: We propose a novel approach to regularize deep registration with a deformation vextor field (DVF) representation model using computed tomography angiography (CTA). In the form of a convolutional auto-encoder, the MRM was trained to capture the spatially variant pattern of feasible DVF Jacobian. The CTA-derived MRM was then incorporated into an unsupervised network to facilitate MRI registration. In the experiment, 10 CTAs were used to derive the MRM. The method was tested on 10 0.35 T scans in long-axis view with manual segmentation and 15 3 T scans in short-axis view with tagging-based landmarks. Results: Introducing the MRM improved registration accuracy and achieved 2.23, 7.21, and 4.42 mm 80% Hausdorff distance on left ventricle, right ventricle, and pulmonary artery, respectively, and 2.23 mm landmark registration error. The results were comparable to carefully tuned SimpleElastix, but reduced the registration time from 40 s to 0.02 s. The MRM presented good robustness to different DVF sample generation methods. Conclusion: The model enjoys high accuracy as meticulously tuned optimization model and the efficiency of deep networks. Significance: The method enables model to go beyond the quality limitation of MRI. The robustness to training DVF generation scheme makes the method attractive to adapting to the available data and software resources in various clinics.
引用
收藏
页码:1828 / 1836
页数:9
相关论文
共 32 条
[1]   Quantification in cardiac MRI: advances in image acquisition and processing [J].
Attili, Anil K. ;
Schuster, Andreas ;
Nagel, Eike ;
Reiber, Johan H. C. ;
van der Geest, Rob J. .
INTERNATIONAL JOURNAL OF CARDIOVASCULAR IMAGING, 2010, 26 :27-40
[2]   VoxelMorph: A Learning Framework for Deformable Medical Image Registration [J].
Balakrishnan, Guha ;
Zhao, Amy ;
Sabuncu, Mert R. ;
Guttag, John ;
Dalca, Adrian, V .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2019, 38 (08) :1788-1800
[3]   A Cooperative Autoencoder for Population-Based Regularization of CNN Image Registration [J].
Bhalodia, Riddhish ;
Elhabian, Shireen Y. ;
Kavan, Ladislav ;
Whitaker, Ross T. .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2019, PT II, 2019, 11765 :391-400
[4]   Automated registration of dynamic MR images for the quantification of myocardial perfusion [J].
Bidaut, LM ;
Vallée, JP .
JOURNAL OF MAGNETIC RESONANCE IMAGING, 2001, 13 (04) :648-655
[5]   Unsupervised Learning for Fast Probabilistic Diffeomorphic Registration [J].
Dalca, Adrian V. ;
Balakrishnan, Guha ;
Guttag, John ;
Sabuncu, Mert R. .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2018, PT I, 2018, 11070 :729-738
[6]   Cardiac Radiology: Centenary Review [J].
de Roos, Albert ;
Higgins, Charles B. .
RADIOLOGY, 2014, 273 (2S) :S142-S159
[7]   A deep learning framework for unsupervised affine and deformable image registration [J].
de Vos, Bob D. ;
Berendsen, Floris F. ;
Viergever, Max A. ;
Sokooti, Hessam ;
Staring, Marius ;
Isgum, Ivana .
MEDICAL IMAGE ANALYSIS, 2019, 52 :128-143
[8]   Adversarial learning for mono- or multi-modal registration [J].
Fan, Jingfan ;
Cao, Xiaohuan ;
Wang, Qian ;
Yap, Pew-Thian ;
Shen, Dinggang .
MEDICAL IMAGE ANALYSIS, 2019, 58
[9]   Cardiovascular imaging trends in congenital heart disease: A single center experience [J].
Han, B. Kelly ;
Lesser, Andrew M. ;
Vezmar, Marko ;
Rosenthal, Kristi ;
Rutten-Ramos, Stephanie ;
Lindberg, Jana ;
Caye, David ;
Lesser, John R. .
JOURNAL OF CARDIOVASCULAR COMPUTED TOMOGRAPHY, 2013, 7 (06) :361-366
[10]   Deep learning in medical image registration: a survey [J].
Haskins, Grant ;
Kruger, Uwe ;
Yan, Pingkun .
MACHINE VISION AND APPLICATIONS, 2020, 31 (01)