ISSR-PCR:: Tool for discrimination and genetic structure analysis of Plutella xylostella populations native to different geographical areas

被引:57
作者
Roux, O.
Gevrey, M.
Arvanitakis, L.
Gers, C.
Bordat, D.
Legal, L.
机构
[1] Univ Toulouse 3, UMR CNRS 5172, Lab Dinam Biodiversite, F-31062 Toulouse 9, France
[2] CSIRO, CIRAD, UPR Hort, F-34398 Montpellier 5, France
关键词
decision-making tool; Inter Simple Sequence Repeat; genetic differentiation; Plutella xylostella; Self-Organising Map; pest management; population analysis;
D O I
10.1016/j.ympev.2006.09.017
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The diamondback moth (DBM), Plutella xyloslella (L.) is considered as the most destructive pest of Brassicaceae crops world-wide. Its migratory capacities and development of insecticide resistance in many populations leads to more difficulties for population management. To control movement of populations and apparitions of resistance carried by resistant migrant individuals, populations must be identified using genetic markers. Here, seven different ISSR markers have been tested as a tool for population discrimination and genetic variations among 19 DBM populations from Canada, USA, Brazil, Martinique Island, France, Romania, Austria, Uzbekistan, Egypt, Benin, South Africa, Reunion Island, Hong Kong, Laos, Japan and four localities in Australia were assessed. Two classification methods were tested and compared: a common method of genetic distance analyses and a novel method based on an advanced statistical method of the Artificial Neural Networks' family, the Self-Organizing Map (SOM). The 188 loci selected revealed a very high variability between populations with a total polymorphism of 100% and a global coefficient of gene differentiation estimated by the Nei's index (Gst) of 0.238. Nevertheless, the largest part of variability was expressed among individuals within populations (AMOVA: 73.71% and mean polymorphism of 94% within populations). Genetic differentiation among the DBM populations did not reflect geographical distances between them. The two classification methods have given excellent results with less than 1.3% of misclassified individuals. The origin of the high genetic differentiation and efficiency of the two classification methods are discussed. (c) 2006 Elsevier Inc. All rights reserved.
引用
收藏
页码:240 / 250
页数:11
相关论文
共 78 条
  • [1] DDT-RESISTANCE IN PLUTELLA-MACULIPENNIS (CURT) (LEP) IN JAVA']JAVA
    ANKERSMIT, GW
    [J]. BULLETIN OF ENTOMOLOGICAL RESEARCH, 1953, 44 (03) : 421 - &
  • [2] Application of AFLP, RAPD and ISSR markers to genetic mapping of European and Japanese larch
    Arcade, A
    Anselin, F
    Rampant, PF
    Lesage, MC
    Pâques, LE
    Prat, D
    [J]. THEORETICAL AND APPLIED GENETICS, 2000, 100 (02) : 299 - 307
  • [3] ARVANITAKIS L, 2002, P INT S MONTP, P135
  • [4] Inter-simple sequence repeat (ISSR) amplification for analysis of microsatellite motif frequency and fingerprinting in rice (Oryza sativa L.)
    Blair, MW
    Panaud, O
    McCouch, SR
    [J]. THEORETICAL AND APPLIED GENETICS, 1999, 98 (05) : 780 - 792
  • [5] Utilisation of non-supervised neural networks and principal component analysis to study fish assemblages
    Brosse, S
    Giraudel, JL
    Lek, S
    [J]. ECOLOGICAL MODELLING, 2001, 146 (1-3) : 159 - 166
  • [6] Inter-single-sequence-repeat-PCR typing as a new tool for identification of Microsporum canis strains
    Cano, J
    Rezusta, A
    Solé, M
    Gil, J
    Rubio, MC
    Revillo, MJ
    Guarro, J
    [J]. JOURNAL OF DERMATOLOGICAL SCIENCE, 2005, 39 (01) : 17 - 21
  • [7] ALLOZYMES USED TO ESTIMATE GENE FLOW AMONG POPULATIONS OF DIAMONDBACK MOTH (LEPIDOPTERA, PLUTELLIDAE) IN HAWAII
    CAPRIO, MA
    TABASHNIK, BE
    [J]. ENVIRONMENTAL ENTOMOLOGY, 1992, 21 (04) : 808 - 816
  • [8] CHACKO J, 2002, P INT S MONTP FRANC, P147
  • [9] Mitochondrial DNA sequence variation among geographic strains of diamondback moth (Lepidoptera: Plutellidae)
    Chang, WXZ
    Tabashnik, BE
    Artelt, B
    Malvar, T
    Ballester, V
    Ferre, J
    Roderick, GK
    [J]. ANNALS OF THE ENTOMOLOGICAL SOCIETY OF AMERICA, 1997, 90 (05) : 590 - 595
  • [10] High-altitude migration of the diamondback moth Plutella xylostella to the UK:: a study using radar, aerial netting, and ground trapping
    Chapman, JW
    Reynolds, DR
    Smith, AD
    Riley, JR
    Pedgley, DE
    Woiwod, IP
    [J]. ECOLOGICAL ENTOMOLOGY, 2002, 27 (06) : 641 - 650